Lingyan Shi

🚀 Calling all early-career researchers in single-cell genomics and spatial biology!

Abstract submissions are OPEN for the 2026 Gordon Research Seminar (GRS): Spatial Omics × AI/ML
🗓 May 9–10, 2026 | Les Diablerets, Switzerland

Submit here: www.grc.org/single-cell-...

#SpatialOmics #AIML #GRS

Can we visualise cellular metabolism in ageing? | Associate Professor Lingyan Shi YouTube video by NUS Medicine

youtu.be/Ww6NerNmQKQ?...

Big thanks also to all the collaborators at UCSD and USC: Longwei + Peter Wang, @faldalf.bsky.social + Scott Fraser, Zack, Hiro+ Joh Schöneberg, Yajuan + Lingyan Shi, and Theresa + Jerrold Olefsky.
Also grateful to @anne-lyons-bioe.bsky.social for all the help with super-res image analysis!

This work was done by an amazing team of PhD students, undergraduate students, postdoctoral fellows, and wonderful colleagues at Hopkins, Yale (Rong Fan, Xiaoyu Qin, and Mei Zhong), UCSD (Lingyan Shi and Yajuan Li), the Max Planck Institute (David Zwicker), and U. Florida (Mark Atkinson and team).

Multimodal SRS imaging reveals metabolic remodeling in ovarian precancerous lesions.

In collaboration with Prof. Lingyan Shi (UCSD), we integrated spatial metabolomics into a new 3D tissue mapping workflow at single-cell resolution

More here: www.biorxiv.org/content/10.1...

Up for a treat! @stimulatedraman.bsky.social presenting.

A Clearer Look at Diabetic Kidney Disease via New Optical Imaging Technology Researchers have developed a powerful new way to look inside kidney tissues, without needing to stain or damage the tissue samples. The new technique reveals early signs of disease often missed by tra...

Congratulations Professor Shi (@stimulatedraman.bsky.social) for your outstanding work imaging diseased tissue. Your contributions will no doubt lead to life-saving cures. Our gratitude to you!

today.ucsd.edu/story/a-clea...

Massimiliano Di Ventra and Lingyan Shi

Congratulations to two UC San Diego faculty, Massimiliano Di Ventra, a theoretical physicist, and Lingyan Shi, an expert in imaging and spectroscopy, who were elected to the National Academy of Inventors! 👏🔱 bit.ly/41BD5kJ

UC San Diego Department of Bioengineering Impact Report - Fall 2024 | PDF to Flipbook UC San Diego Shu Chien - Gene Lay Department of Bioengineering, Jacobs School of Engineering impact report.. PDF to flipbook converted using heyzine.com

Our Fall 2024 Impact Report just dropped from the UCSD Jacobs Chien-Lay Department of #Bioengineering!
Check out amazing updates from students, faculty, and staff! #TritonPride 🔱
heyzine.com/flip-book/1c...

My first post here on our research 🥳. Two preprints from my lab at Yale and Dr. Lingyan Shi’s lab at UCSD report same tissue section multi-modal spatial omics mapping! Please check them out. 🤩