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Ben Jenkins

@benkinsjenkins

Molecular mechanisms of endosymbiosis | Herchel Smith fellow @camwallerlab | EMBO SEG @guse_lab | formerly @oxfordbiology | 🦠 Paramecium bursaria | πŸͺΈ Aiptasia

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08.11.2024
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Latest posts by Ben Jenkins @benkinsjenkins

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The cellular mechanics of symbiosis: sensing friend from foe

Dear all, registration for the upcoming EMBO/EMBL Symposium on "the cellular mechanics of symbiosis" is now OPEN 🀩 ! Feel free to register ! www.embl.org/about/info/c...
#EESSymbiosis #ProtistsOnSky #SymbioSky
@hassansalem.bsky.social @berasymbionts.bsky.social @embl.org

29.09.2025 08:15 πŸ‘ 51 πŸ” 28 πŸ’¬ 0 πŸ“Œ 0
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πŸ“’#TMHMS25 is just around the corner! 🦠🌊

Join us to dive into the latest discoveries in #marinehostmicrobesymbioses and explore how microbial superpowers can contribute to restoring ocean health!

Please share with fellow marine science and microbiology enthusiasts!

19.08.2025 13:42 πŸ‘ 8 πŸ” 5 πŸ’¬ 1 πŸ“Œ 1
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@mingpapilio.bsky.social shaking up evolutionary theory at #eseb2025

Models linking species diversity with ecological stability may not be as straightforward as we thought! Amazing talk

18.08.2025 13:24 πŸ‘ 15 πŸ” 5 πŸ’¬ 0 πŸ“Œ 0

Congrats! Such a neat system

31.07.2025 13:16 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Check out our new preprint all about Pirsonia, a tiny killer of bloom-forming Coscinodiscus diatoms!
www.biorxiv.org/content/10.1...
#protistsonsky #marinemicrobes πŸŒŠπŸ”¬

30.07.2025 15:04 πŸ‘ 49 πŸ” 24 πŸ’¬ 4 πŸ“Œ 1
Custom made microscope setup to live image samples from a 96 well plate

Custom made microscope setup to live image samples from a 96 well plate

Spent the week in Cambridge with @benkinsjenkins.bsky.social testing this custom made microscope to live image Aiptasia larvae. Got some cool videos that we hope to share very soon! Thanks for hosting me Ben!

04.07.2025 07:43 πŸ‘ 6 πŸ” 1 πŸ’¬ 0 πŸ“Œ 1

Very exciting!

Had a great time messing with microscopes and sea anemones with @micro-megs.bsky.social this week

04.07.2025 16:44 πŸ‘ 4 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
AI generated-picture

AI generated-picture

πŸͺΈπŸŒŠ Hidden coral cities!

Scientists just found ancient β€œsuper reefs” in the Maldives’ twilight zone, thriving reefs that may help restore shallow corals threatened by climate change.

Source: www.mapthegiants.com

#Morivationmonday

30.06.2025 04:48 πŸ‘ 6 πŸ” 1 πŸ’¬ 2 πŸ“Œ 0

πŸ“’ Deadline extended to May 5!
Join our #ESEB2025 symposium on symbioses in microbial eukaryotes - from the origin of organelles to their roles in ecosystem functioning. Share your work and meet our great speakers @cstairs.bsky.social & @benkinsjenkins.bsky.social

#ESEB25 #Symbiosis #ProtistOnSky

01.05.2025 17:22 πŸ‘ 10 πŸ” 4 πŸ’¬ 0 πŸ“Œ 0
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First study from the lab is out! We describe ApuRs, a new family of microbial rhodopsins unique from apusomonads. ApuRs represent the first anion-conducting rhodopsin channels that can be controlled by UV light, offering potential as new optogenetic tools. #protistsonsky
doi.org/10.1101/2025...
πŸ‘‡

18.04.2025 09:07 πŸ‘ 57 πŸ” 26 πŸ’¬ 5 πŸ“Œ 2

This is very cool! Do you reckon reduced cell-cycle control has any influence on bleaching tolerance when Durusdinium is present?

17.04.2025 09:36 πŸ‘ 0 πŸ” 0 πŸ’¬ 2 πŸ“Œ 0
Cell cycle arrest in the cnidarian-dinoflagellate symbiosis.

Cell cycle arrest in the cnidarian-dinoflagellate symbiosis.

Corals maintain stable populations of essential photosynthetic symbionts by controlling their cell cycle, not by eating them! Our new #PNAS paper monitored and modelled #aiptasia cell cycle, autophagy, and expulsion for over a year. #symbiosis #microbiology www.pnas.org/doi/10.1073/...

04.04.2025 00:04 πŸ‘ 30 πŸ” 14 πŸ’¬ 2 πŸ“Œ 0

I am obviously biased, but this should be a great conference (as long as you don't mind hearing me go on about Paramecium and corals) ! 🦠πŸͺΈ

14.04.2025 14:32 πŸ‘ 6 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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I've been busy the last couple years developing Aiptasia as a genetically tractable model organism to study corals. Here you can see me injecting CRISPR-Cas9 into these fragile little Aiptasia zygotes. Hopefully soon we will have our very first mutant lines!

14.04.2025 14:19 πŸ‘ 8 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

Absolutely phenomenal week for the #EESWildModels.
A pure celebration of biological wonders, and incredibly engaged participants.
Thanks to all the co-organizers and @events.embl.org for making this possible !
See you in 2027 ? (please fill the feedback form)

12.04.2025 11:56 πŸ‘ 33 πŸ” 6 πŸ’¬ 1 πŸ“Œ 0

Very excited for this first of its kind EMBO/EMBL Symposium on the Wild Frontiers of Model Organisms.
So far Session 1 is a blast, from aiptasia symbiosis, oyster vibrio phage interactions, !!
#EESWildModels
@embldbunit.bsky.social
@embl.org

08.04.2025 14:15 πŸ‘ 24 πŸ” 8 πŸ’¬ 0 πŸ“Œ 0
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I had a wild time presenting my coral work for the first time at EMBO/EMBL #EESWildModels.

Massive thanks to @embl.org @events.embl.org and the organisers for putting this together. It was a real pleasure to interact with so many weird and wonderful creatures...
...and their model organisms (!!)

11.04.2025 13:14 πŸ‘ 18 πŸ” 4 πŸ’¬ 0 πŸ“Œ 0
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Novel dopaminergic neurotransmission in the Octopus visual system Coleoid cephalopods such as the common octopus have a complex visual system, with a camera-type eye and a large optic lobe, that evolved independently from its counterpart in vertebrates. However, the...

Very excited and proud to finally share this story! πŸ™

We discovered surprising roles for dopamine and acetylcholine in the Octopus visual system…
doi.org/10.1101/2025...

04.04.2025 17:03 πŸ‘ 51 πŸ” 17 πŸ’¬ 1 πŸ“Œ 4

Culturing of two Asgard archaea in the Hodarchaeales order - the closest relatives to eukaryotes

www.biorxiv.org/content/10.1...

20.03.2025 07:02 πŸ‘ 3 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0
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A robustly rooted tree of eukaryotes reveals their excavate ancestry - Nature The root of the eukaryote Tree of Life is estimated from a new, larger dataset of mitochondrial proteins including all known eukaryotic supergroups, showing it lies between two multi-supergroup assemb...

I'm pleased to introduce our new paper rooting the eukaryote Tree of Life (eToL) that resulted from a collaboration led by PhD student Kelsey Williamson and a large group of collaborators doi.org/10.1038/s415...htt

14.03.2025 11:38 πŸ‘ 152 πŸ” 64 πŸ’¬ 3 πŸ“Œ 7
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A robustly rooted tree of eukaryotes reveals their excavate ancestry - Nature The root of the eukaryote Tree of Life is estimated from a new, larger dataset of mitochondrial proteins including all known eukaryotic supergroups, showing it lies between two multi-supergroup assemb...

🚨 New paper alert! 🚨

A robustly rooted tree of eukaryotes sheds light on their deep evolutionary ancestryβ€”suggesting that the Last Eukaryotic Common Ancestor (LECA) may have had an excavate-like cell architecture. πŸ§΅πŸ”¬ (1/) www.nature.com/articles/s41...

12.03.2025 16:39 πŸ‘ 142 πŸ” 75 πŸ’¬ 5 πŸ“Œ 5

Thanks! The work is great and I had a lot of fun writing this

13.03.2025 13:30 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Phylogenomics of coral-infecting corallicolids reveal multiple independent losses of chlorophyll biosynthesis in apicomplexan parasites The transition from free-living to parasitic lifestyles induces major shifts in evolution, and nowhere is this more acute than in apicomplexansβ€”obliga…

If you haven't already, read the fantastic original publication by Jacko-Reynolds @ambonacolta.bsky.social @fonamental.bsky.social @pjkeelinglab.bsky.social and the gang

www.sciencedirect.com/science/arti...

13.03.2025 12:13 πŸ‘ 4 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
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Check out our dispatch on apicomplexans that infect corals!

www.sciencedirect.com/science/arti...

These parasite-like partners have lost photosynthesis but retained chlorophyll... are they friend or foe?

@currentbiology.bsky.social #protistsonsky #symbiosky #microsky #coralreefs

13.03.2025 12:11 πŸ‘ 44 πŸ” 25 πŸ’¬ 3 πŸ“Œ 0
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Coexistence Theory for Microbial Ecology, and Vice Versa Classical models from theoretical ecology are seeing increasing uptake in microbial ecology, but there remains rich potential for closer cross-pollination. Here we explore opportunities for stronger ....

In our new paper we discuss how modern coexistence theory can help microbial ecologists tackle fundamental & applied questions, and how microbial systems can help to push coexistence theory forward! With Andrew Letten and Dave Armitage (@darmitage.bsky.social). doi.org/10.1111/1462...

12.03.2025 05:35 πŸ‘ 33 πŸ” 23 πŸ’¬ 2 πŸ“Œ 2
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PhD position available in Ceske Budejovice (Czechia), funded by ERC KLEPTOS, to study plastid endosymbiosis in kleptoplastidic protists. Are you curious about this process and do you like sampling/cultivation of protists? Join our team by applying here: jobs.bc.cas.cz/en/detail/243

#protistsonsky

12.03.2025 08:24 πŸ‘ 40 πŸ” 41 πŸ’¬ 0 πŸ“Œ 1
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Phylogenomics of coral-infecting corallicolids reveal multiple independent losses of chlorophyll biosynthesis in apicomplexan parasites Jacko-Reynolds etΒ al. present multi-protein phylogenetics supporting corallicolids as a late-branching apicomplexan, closely related to coccidians. The expression of chlorophyll biosynthesis genes in ...

New corallicolid pub in @currentbiology.bsky.social!πŸͺΈπŸ§¬

Highlights:
🌳 Phylogenomic support for Corallicolids as sister to the Ichthyocolids
β˜€οΈCorallicolids express nuclear & plastid encoded Chl biosynthesis genes
❌Multiple, parallel losses of CBP in Apicomplexa
#ProtistsOnSky #CoralReefs #MicroSky

18.02.2025 19:50 πŸ‘ 24 πŸ” 10 πŸ’¬ 2 πŸ“Œ 0

Is it this one? Congrats everyone #protistsonsky

www.cell.com/current-biol...

20.02.2025 16:07 πŸ‘ 14 πŸ” 5 πŸ’¬ 0 πŸ“Œ 0
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Paper came out today that represents a long trip for many members of my lab. It took years to get these methods to work and gather the data so everyone involved should be very proud of the interesting outcome. Thanks to the whole gang for their perseverance on this one!

20.02.2025 14:55 πŸ‘ 26 πŸ” 7 πŸ’¬ 1 πŸ“Œ 1
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Have you used #network_analyses in the past to analyse your #ecology data? Have you wondered how many of those correlations actually represent interactions between #microorganisms? Here I present a paper how we leveraged #protistsonsky to evaluate the validity of the method. A thread:

04.02.2025 13:37 πŸ‘ 34 πŸ” 16 πŸ’¬ 1 πŸ“Œ 2