Babak Vajdi Hokmabad's Avatar

Babak Vajdi Hokmabad

@babakvh

Postdoc | Princeton University Active soft matter, Fluid mechanics, Biophysics. https://scholar.google.de/citations?hl=en&user=QLNh8EwAAAAJ&view_op=list_works&sortby=pubdate

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22.08.2023
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Latest posts by Babak Vajdi Hokmabad @babakvh

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Iran’s Students Are Protesting Again. Here’s Why. The unrest underlines the intensity of domestic discontent, even as Tehran’s government grapples with the threat of U.S. strikes. Here’s what to know.

Students at universities around Iran have been staging campus protests calling for the government to be overthrown, in the country’s first large-scale demonstrations since a brutal state crackdown on nationwide dissent last month. Here’s what to know.

27.02.2026 19:00 👍 65 🔁 19 💬 7 📌 0

Thank you, Saverio! It was a fun experiment, indeed, and there's so much more to explore :)

08.10.2025 18:33 👍 1 🔁 0 💬 0 📌 0

Excited to see this paper out @pnas.org

Microbial self-organization in response to self-made oxygen gradients! 🦠 🔄 🍥

07.10.2025 14:00 👍 6 🔁 1 💬 0 📌 1
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PhD or Master's position available for Fall 2026!

Interested in how actin drives cell crawling, eating, dividing, or osmoregulation? What about pathogenesis of a brain-eating amoeba? Or eukaryotic evolution? If so, apply through my website: katrinavelle.wixsite.com/science/cont...
Please share!

05.10.2025 17:29 👍 48 🔁 29 💬 1 📌 5
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We have a postdoc opening for a protistologist with biophysics inclinations to join our @hfspo.bsky.social project! (focus will be on characterising the morphology, ultrastructure and behaviour of excavates) #protistsonsky

Apply by Sept 17th (RTs appreciated!)
jobs.exeter.ac.uk/hrpr_webrecr...

06.08.2025 19:19 👍 47 🔁 49 💬 1 📌 0
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Excited to release our latest work:
doi.org/10.1101/2025...

Here, we describe how confined bacterial suspensions self-organize into structured domains of different motilities, in response to oxygen limitations🦠🍥

Bluetorial follows! [1/8]

27.02.2025 17:28 👍 8 🔁 5 💬 1 📌 1
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Genome duplication in a long-term multicellularity evolution experiment - Nature In the Multicellularity Long Term Evolution Experiment, diploid yeast evolve to be tetraploid under selection for larger multicellular size, revealing how whole-genome duplication can arise due to its...

1/46 Hey folks, we have a new paper out on the MuLTEE. Strap in and I’ll tell you the story of how this “little paper on polyploidy” turned into the most data rich paper our lab has produced, largely thanks to the leadership and work ethic of @kaitong25.bsky.social.

www.nature.com/articles/s41...

05.03.2025 22:59 👍 367 🔁 166 💬 16 📌 19

It was fun to uncover this story—bridging microbial physiology, biological pattern formation, & active matter physics. The results may even have implications for controlling microbes in applications. We'd love your feedback. Please report/share with whoever might be interested! [8/8]

27.02.2025 17:28 👍 2 🔁 1 💬 0 📌 0
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Many biological fluids are polymer solutions, whose viscoelasticity can enhance cell swimming and promote large-scale mixing.
We showed that the core-shell organization also arises in polymer solutions, but with fascinating additional flow fluctuations. [7/8]

27.02.2025 17:28 👍 1 🔁 1 💬 1 📌 0
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We then developed a biophysical model describing this interplay quantitatively. The model recapitulates the experiments, and also yields criteria for predicting the different ways in which confined bacterial populations self-organize under different conditions. [6/8]

27.02.2025 17:28 👍 1 🔁 1 💬 1 📌 0

Cells consume O2, creating a gradient that alters motility: (i) They move up the gradient toward the droplet boundary via aerotaxis, & (ii) They stop swimming in the anoxic droplet core and accumulate. These motility variations in turn reshape O2 fluxes. A feedback loop! [5/8]

27.02.2025 17:28 👍 1 🔁 1 💬 1 📌 0

By simultaneously measuring cell distributions, oxygen concentration, and swimming-generated fluid flow, we figured out that this spatial organization is driven by the interplay between cell metabolism-generated oxygen gradients and collective motility. [4/8]

27.02.2025 17:28 👍 1 🔁 1 💬 1 📌 0
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Surprisingly, when the droplets are big and concentrated, the cells self-organize into a concentrated inner "core" of immotile cells surrounded by a more dilute outer "shell" of highly motile cells. (See movie in 1st tweet.) In some cases, the core shrinks and disappears. [3/8]

27.02.2025 17:28 👍 1 🔁 1 💬 1 📌 0
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Bacteria often inhabit confined spaces, such as biological tissues/gels & soils/sediments, where metabolites are scarce. What influence does confinement have on a population of motile bacteria?
We addressed this question by studying quasi 2D droplets of swimming E. coli. [2/8]

27.02.2025 17:28 👍 1 🔁 1 💬 1 📌 0
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Excited to release our latest work:
doi.org/10.1101/2025...

Here, we describe how confined bacterial suspensions self-organize into structured domains of different motilities, in response to oxygen limitations🦠🍥

Bluetorial follows! [1/8]

27.02.2025 17:28 👍 8 🔁 5 💬 1 📌 1
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Intracellular competition shapes plasmid population dynamics Conflicts between levels of biological organization are central to evolution, from populations of multicellular organisms to selfish genetic elements in microbes. Plasmids are extrachromosomal, self-r...

I'm so happy that I can finally share the results of my first postdoc paper with @baym.lol!!! Turns out plasmids are an amazing system to study multi-scale evolution and we can track within-cell and between-cell dynamics!
(1/n) www.biorxiv.org/content/earl...

21.02.2025 20:36 👍 197 🔁 84 💬 10 📌 15
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The 🪱 mania continues!
In our latest study, led by Rosa, we explored the locomotion and dynamics of living worms—acting as active polymers—navigating a porous environment made of 3D-printed pillar arrays. And we found something surprising...

13.02.2025 08:45 👍 16 🔁 3 💬 1 📌 0
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Spatial population dynamics of bacterial colonies with social antibiotic resistance

#PNAS by @marlis.bsky.social and late Kevin B. Wood

www.pnas.org/doi/10.1073/...

13.02.2025 16:09 👍 39 🔁 7 💬 1 📌 2
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Stickiness matters! From powder handling to geophysical flows, cohesion in granular material plays a crucial role. We review in Soft Matter @roysocchem.bsky.social experimental approaches to create and control inter-particle adhesion pubs.rsc.org/en/content/a...

03.02.2025 16:54 👍 16 🔁 4 💬 2 📌 0
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🄱🄸🄾🄵🄸🄻🄼
🄱🄸🄾🄿🄷🅈🅂🄸🄲🅂

Fascinating work from Sebastian Gonzalez La Corte, Sujit Data, et al at CalTech on polymer-induced entropic attractions that hinder diffusion and lead bacteria to form long spaghetti-like cables within mucus and biofilms

Paper in Science Advances: www.science.org/doi/10.1126/...

19.01.2025 14:10 👍 129 🔁 21 💬 5 📌 0
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Fresh off the press, our work on wing deployment in Drosophila 🪰:
www.nature.com/articles/s41...
Work by: Simon Hadjaje, Ignacio Andrade-Silva, Marie-Julie Dalbe and Raphaël Clément

11.12.2024 14:00 👍 152 🔁 52 💬 8 📌 8
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Vodka can propel tiny robots across the water A popular science classroom demonstration could one day lead to applications in powering tiny robots.
03.12.2024 15:40 👍 36 🔁 8 💬 4 📌 6

Can I please be added here?

22.11.2024 15:38 👍 1 🔁 0 💬 0 📌 0

This is a beautiful work Nico! Congrats!

22.11.2024 15:36 👍 1 🔁 0 💬 1 📌 0

Starter Pack: Collective #CellMigration /Dynamics is growing. Looking at related emergent phenomena eg. #intercallation, dorsal closure or branching #morphogenesis? Reach out! Also modelers, soft-matter physicists & YOUNG scientists etc etc!

go.bsky.app/DLUDYX3
#cellbio #SoftMatterPhysics #science

19.11.2024 16:25 👍 70 🔁 38 💬 26 📌 4

Can I please be added here?

22.11.2024 15:35 👍 1 🔁 0 💬 0 📌 0

Can I please be added here?

22.11.2024 15:34 👍 1 🔁 0 💬 1 📌 0

Can I please be added here?

22.11.2024 15:32 👍 1 🔁 0 💬 1 📌 0

Can I please be added here?

22.11.2024 15:31 👍 0 🔁 0 💬 1 📌 0