de.NBI & ELIXIR Germany

Take a look to the our newest BRENDA Release 2026.1 on www.brenda-enzymes.org @dsmzd3.bsky.social @denbi.bsky.social #ELIXIR @dsmz.bsky.social

Celebrating two major milestones at the de.NBI Cloud! 🎉 We've surpassed 5,000 registered users and over 2,000 publications referencing our platform.

As a free compute & storage resource for German academia, we are proud to empower the scientific community. 🇩🇪 🧬

Thank you for your trust! 🙌

TelomereHunter2 Workshop in Heidelberg! 🔬✨

Ready to analyze telomere maintenance mechanisms in cancer, immunology, or aging?

📅 Date: April 14, 2026
🏫 Location: Im Neuenheimer Feld 242, HD
🛠️ Tool: TelomereHunter2

Register here: www.denbi.de/training-cou...

#Bioinformatics #AgingResearch #Telomere

⏰ GCC2026 scholarship applications are due March 15!
Support is available from the JXTX Foundation, JJ Fund, and the Galaxy Community Fund to help graduate students and postdocs attend the Galaxy Community Conference 2026 in Clermont-Ferrand, France.

Apply here: galaxyproject.org/events/gcc20...

Secure research is no longer optional—it's imperative. 🛡️💻

From Omics to Geospatial data, our new whitepaper breaks down how de.NBI Cloud powers SPEs & TREs for the scientific community. 🔬✨

📂 Get the whitepaper: zenodo.org/records/1878...

#CyberSecurity #OpenScience #deNBI #TRE #Bioinformatics

#biodiversity #bioinformatics Summer School ... 21-26 June in Siegen, Germany co-organised by @sib.swiss & @denbi.bsky.social
www.sib.swiss/training/cou...
🟢 eDNA & ecosystems
🟣 pangenome diversity
🔵 population genetics
🟡 comparative genomics
Register to apply, selections will start from March 16th

Tool of the week: Stop struggling with complex pipelines. 🧬

MdOA offers end-to-end metaproteomics directly in your browser. From raw MS/MS processing to clinical risk modeling—with no installation.

✅ Free for academic life scientists.
🚀 mdoa-tools.bi.denbi.de/home

#Metaproteomics #Bioinformatics

Very much looking forward to our 10th (anniversary!) Microbial Genomics Training Course provided by #BiGi @denbi.bsky.social in Gießen.

3 days full of free hands-on microbial genomics training - from QC, assembly and annotation to genome submissions and comparative genomics.

🧬 Join the 10th #Microbial #Genomics #Training Course in Gießen!
📅 June 24–26, 2026 | @jlugiessen.bsky.social
🔬 Learn genome assembly, annotation (w/ #Bakta), comparative genomics ( #EDGAR), & more!
💻 Hands-on, custom data consulting, tools
📩 Info: www.denbi.de/training-cou...
#Bioinformatics

🌏 SLING Lipidomics Workshop @ NUS supported by @denbi.bsky.social brought 40+ researchers together for hands-on #Skyline, #LipidCreator & #FAIR data! Thanks to all organizers, trainers & speakers for the inspiring science & lively AI discussions! 🧬🤝 #Lipidomics #AI

📢 ELIXIR Estonia’s FREE #Datavisualization course!
📊 Learn chart selection, best practices & colour use.
🖥️ Online, March 12.
elixir.ut.ee/news/2026/02...

#DataViz #ELIXIREstonia #FreeCourses

Are you passionate about computational biology and the evolution of specialized plant metabolism? We invite highly motivated and experienced students and early-career researchers to join our group in Bonn for a visiting research stay. This is a great opportunity to gain hands-on experience, exchange ideas, and work in a collaborative and supportive scientific environment with excellent computational resources. We especially welcome colleagues with prior research experience in bioinformatics, phylogeny, evolutionary biology, or comparative genomics, and a strong interest in plant metabolism. Master’s students and candidates looking to strengthen their research profile are strongly encouraged to reach out. If you are proactive, curious, and eager to conduct your own research project, we would love to hear from you. More details and contact information: https://www.izmb.uni-bonn.de/en/pbb/contact#EBPCM #ComputationalBiology #Bioinformatics #EvolutionaryBiology #ComparativeGenomics #ResearchOpportunity #EarlyCareerResearchers #PhDOpportunity #ScientificCollaboration #ResearchInGermany

Are you passionate about computational biology and the evolution of specialized plant metabolism?

More details and contact information:
www.izmb.uni-bonn.de/en/pbb/conta...

#Bioinformatics #Genomics #ResearchInGermany @puckerlab.bsky.social

Just one week to go! 🗓️

Join @denbi.bsky.social and @ghga.bsky.social on 3rd March at 13:00 CET for our joint webinar.

Polina Polunina will demonstrate how to handle incomplete DMS datasets using #VEFill and machine learning.

Don't miss out—register today! 📍 t1p.de/95olc

🔬✨ Tool of the week: #Metagenomic data analysis made easy!
🚀 The Metagenomics-Toolkit offers a complete workflow: from raw Illumina or Nanopore reads 📈 to taxonomic 🦠 and functional 🧬 insights.
📊 Reproducible, publish-ready results.
Ready to boost your research? 🌍📝
www.denbi.de/services-acc...

🎓 Ready to boost your #teaching in #bioinformatics?
Join us to our Train-the-Bioinformatics-Trainer course at MARUM, University of Bremen, April 14–16, 2026! Only a few spots left!
👩‍🏫 For new & experienced instructors
💻 For more information and registration:
www.denbi.de/training-cou...

#biodiversity #bioinformatics Summer School ... 21-26 June in Siegen, Germany co-organised by @sib.swiss & @denbi.bsky.social
www.sib.swiss/training/cou...
🟢 eDNA & ecosystems
🟣 pangenome diversity
🔵 population genetics
🟡 comparative genomics
Register to apply, selections will start from March 16th

🔬 Ready to level up your skills in integrative multiomics data analysis?
📅 May 18–20, 2026
📍 @dkfz.bsky.social
🧬 Focus: Integrative analysis, interpretable factor models (MOFA, MEFISTO), theory & practice.
🎟️ More details: www.denbi.de/training-cou...
#MultiOmics #Bioinformatics #LifeScienceTraining

EMBL International PhD Programme - summer recruitment 2026! 👀

Research groups across EMBL are recruiting now! www.embl.org/about/info/e...

Don’t miss this opportunity to receive dedicated mentoring while doing interdisciplinary research.

🚀 @uniheidelberg.bsky.social Medical Faculty is hiring!
They’re looking for a Full Stack Developer and a Cloud Engineer (m/f/d) to support the Health + Life Science Alliance Data Space.
🔗 Learn more and apply: www.denbi.de/news1/2045-j...
#JobAlert #Bioinformatics #Cloud #Developer #HealthData

Tool of the week: Comparing microbial #genomes just got easier. EDGAR – comparative genomics without the headaches. Publication-ready figures, genome similarity analyses, phylogenetic trees. All in one platform. 🧬
edgar3.computational.bio.uni-giessen.de

Event poster for 'Practical Variant Effect Prediction with Deep Mutational Scanning Data' with Polina Polunina. Scheduled for 3rd March 2026 at 13:00 CET. Organized by GHGA, ELIXIR Germany, and de.NBI.

Join our webinar by #GHGA, #de.NBI & #ELIXIR Germany! 🧬

Polina Polunina (Uni Freiburg) shares a practical walkthrough on Variant Effect Prediction with DMS data and the VEFill model.

🗓 3 March 2026, 13:00 CET 📍 Register: t1p.de/95olc

#Bioinformatics #Genomics #MachineLearning #OpenScience

📣BacDive API Update

Version 2 for the BacDive API endpoints ⌨️ has been introduced due to changes in the structure of the Genome Sequences data.

‼️We recommend migrating as new data added in latest, and upcoming, releases is only available through the BacDive API v2!

👉 api.bacdive.dsmz.de

Banner for the Galaxy Training Academy with the headline “Join our global online training event.” Subheading reads “Call for trainers and helpers” and “Teach your favorite tutorial or contribute a new track.” Date listed as 18–22 May 2026 with a link to gxy.io/GTA2026-trainer. The Galaxy Training Academy logo appears on the left, a colorful circular Galaxy graphic on the right, and a simple line drawing of a classroom with a teacher and students at the bottom.

🧑‍🏫 Help shape the Galaxy Training Academy 2026!

We’re looking for trainers, co-trainers, track organizers, and Slack helpers for GTA2026 (May 18–22, 2026).

Interested in teaching or supporting learners in Galaxy?

Sign up here: forms.gle/e971zSYbjNR4...

[SUBMISSION] OneCite — Universal citation & academic reference toolkit · Issue #267 · pyOpenSci/software-submission Submitting Author: (@HzaCode) All current maintainers: (@HzaCode) Package Name: OneCite One-Line Description of Package: Universal citation & academic reference toolkit—multi-source lookup (DOI/PMI...

Looking for reviewers: OneCite, a universal citation & academic reference toolkit—multi-source lookup, metadata completion, de-duplication, and multi-style output. Proficient in open source willing to help? I'd be happy to onboard you. Here's the issue for the submission: github.com/pyOpenSci/so...

Promotional banner for Galaxy Community Conference 2026 featuring an illustrated scene of Clermont-Ferrand with a volcano, cathedral spires, colorful buildings, and a hot air balloon. Text reads: “Galaxy Community Conference 2026. Clermont-Ferrand, France. June 22–24, 2026. Followed by CoFest: June 25–26, 2026. Early bird registration closes February 28th!”

⏳ Reminder: Early bird registration for GCC2026 closes February 28, 2026!

Join us in Clermont-Ferrand, France, June 22–24, followed by CoFest June 25–26.

Learn more and register now: galaxyproject.org/events/gcc20...

We are the @elixir-europe.org training platform

@denbi.bsky.social is this week in Barcelona for the @elixir-europe.org training platform and training coordinator meeting

Thank you to everyone who joined the ELIXIR Italy All Hands Meeting 2026.
A special thanks to all those who worked behind the scenes to make this event possible.

It was great to see the ELIXIR-IT community come together.

de.NBI & GerBI: Centralized #OMERO for the German BioImaging community

We signed a MoU with German BioImaging (GerBI) to set up a centralized OMERO instance on the de.NBI Cloud.

🍎 Upcoming training: Galaxy Metagenome Training Course 2026
Hosted by @denbi.bsky.social, this hands-on training on metagenomic data analysis using Galaxy will focus on reproducible, accessible workflows.

Learn more & register: www.denbi.de/training-cou...