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Emily Simons

@emsimons

Visiting Fulbright Student @ the AI for Data-Oriented Science Lab. Lifelong learner. Chronically caffeinated champion of crosswords, comedy, and the Oxford comma. Human with humility. And avid alliteration adopter.

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11.12.2024
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Latest posts by Emily Simons @emsimons

An overview of our edge pooling method.

An overview of our edge pooling method.

Big graph, little compute?

In our #NeurIPS2025 paper we propose geometry-aware edge-contraction-based pooling methods for GNNs.

Our methods preserve graph structure, make interpretable pooling choices, and ensure robust performance at downstream tasks.

🧡1/n

11.11.2025 15:48 πŸ‘ 13 πŸ” 4 πŸ’¬ 1 πŸ“Œ 0
An overview of the Euler Characteristic Transform, illustrated for a single Euler Characteristic Curve, i.e., the calculation of Euler characteristics along a single direction.

An overview of the Euler Characteristic Transform, illustrated for a single Euler Characteristic Curve, i.e., the calculation of Euler characteristics along a single direction.

#MachineLearning loves data. #Topology loves shape.
Let's bring them together!

πŸ‘‰The Euler Characteristic Transform (ECT) bridges both worlds, as I outline in a recent article in the Notices of the
@amermathsoc.bsky.social

Engage!

🧡1/n

22.07.2025 08:16 πŸ‘ 10 πŸ” 5 πŸ’¬ 1 πŸ“Œ 1
Preview
a horse drawn carriage going through a grassy area ALT: a horse drawn carriage going through a grassy area

Join us on a (mathematical) journey to a shire - oops, HIGHER - standard and principled evaluation schema for our benchmark datasets. This is the reward of the RINGS framework.

πŸ“’ Blog: aidos.group/blog/rings/
πŸ“ƒ Paper: doi.org/10.48550/arX...
πŸ‘©β€πŸ’» Code: github.com/aidos-lab/ri...

17.07.2025 23:09 πŸ‘ 6 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0

✨Excited to be at ICML 2025 to share our new evaluation framework for graph-learning datasets, work with @dataspider.bsky.social, @jeremy-wayland.bsky.social, @pseudomanifold.topology.rocks

Curious about who shall pass, and who shall not?πŸ€”
Enjoy nods to LoTR?πŸ§β€β™€οΈ
Check out our blog and paper below!

17.07.2025 23:09 πŸ‘ 6 πŸ” 3 πŸ’¬ 1 πŸ“Œ 0
Overcoming Academic Impostor Syndrome

New blog post on overcoming academic impostor syndrome. This arose from great discussions during our group retreat, and I decided to make it publicly available in the hope of providing some utility to #academia.

#AcademicSky #AcademicChatter

bastian.rieck.me/blog/2025/im...

13.03.2025 14:40 πŸ‘ 19 πŸ” 4 πŸ’¬ 1 πŸ“Œ 0
A subset of the AIDOS Lab standing in front of a panoramic view of Bern

A subset of the AIDOS Lab standing in front of a panoramic view of Bern

Our AIDOS Lab website has been fully revamped, thanks to a massive team effort as part of a very fun retreat in #Bern:

aidos.group

Check out our research directions and some of the things we have been up to these days!

#Academia #MachineLearning

01.03.2025 17:37 πŸ‘ 10 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0

Huge congratulations, Bastian! πŸ™ŒIncredibly well-deserved. ⭐️

07.02.2025 19:25 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Genuine! 😁

19.12.2024 18:01 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

We hope SCOTT can prove helpful in shepherding your flock of graphs through curvature filtrations.πŸ‘

Big thanks to @jeremy-wayland.bsky.social for his incredible mentorship throughout. Special thanks also to our Scotland consultants: Mairi McClean and @limbeckkat.bsky.social.🏴󠁧󠁒󠁳󠁣󠁴󠁿

β€˜Til next time!

🧡7/n

19.12.2024 13:58 πŸ‘ 3 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

It is also easy to choose your own SCOTT-ish adventure.πŸš€

Tailor your KILTπŸͺ‘ with customizable curvature measures:
πŸ“Forman & Balanced Forman
πŸ“Ollivier-Ricci
πŸ“Resistance

And vectorize by either:
πŸ”οΈ outlining a persistence landscape, or
πŸ“Έ snapping a persistence image

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19.12.2024 13:58 πŸ‘ 3 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0

The meat of it:

πŸ‘©β€πŸ³ curvature computations with a KILT (Krvature-Informed Links and Topology) object
πŸ‘©β€πŸ³ persistent homology via edge filtrations
πŸ‘©β€πŸ³ vectorization of persistence diagrams
πŸ‘©β€πŸ³ distances between vectorizations

…all baked into a digestible SCOTT-ish haggis.🍽️

🧡5/n

19.12.2024 13:58 πŸ‘ 3 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0

By combining discrete curvature on graphs with persistent homology, SCOTT provides expressive descriptors of graph sets that are:

✨Robust
✨Stable
✨Expressive
✨Compatible with Statistical Testing

…all made easier - and breezier than a day in the Scottish Highlands.πŸ’¨

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19.12.2024 13:58 πŸ‘ 3 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
Preview
GitHub - aidos-lab/curvature-filtrations: Curvature Filtrations for Graph Generative Model Evaluation Curvature Filtrations for Graph Generative Model Evaluation - aidos-lab/curvature-filtrations

Via SCOTT, these methods are now pip installable on a venv near you! πŸš€

πŸ’»: github.com/aidos-lab/cu...
πŸ“‹: aidos.group/curvature-fi...

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19.12.2024 13:58 πŸ‘ 4 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
Preview
Curvature Filtrations for Graph Generative Model Evaluation Graph generative model evaluation necessitates understanding differences between graphs on the distributional level. This entails being able to harness salient attributes of graphs in an efficient man...

πŸš€ Developed with @jeremy-wayland.bsky.social, @pseudomanifold.topology.rocks, SCOTT is the new code base supporting their paper with @joshsouthern.bsky.social @mmbronstein.bsky.social.

Check out the paper here:
πŸ“œ: arxiv.org/abs/2301.12906

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19.12.2024 13:58 πŸ‘ 7 πŸ” 3 πŸ’¬ 1 πŸ“Œ 0
scott-logo

scott-logo

Hi! πŸ‘‹ Emily Simons here, Fulbright Student Researcher with the AIDOS Lab at #HelmholtzMunich.

Happy to be sharing my first contribution to AIDOS in this 🧡.

Say hiya to SCOTT, the perfect holiday (software) package🎁for the #curvature and #graph enthusiast in your life.

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19.12.2024 13:58 πŸ‘ 7 πŸ” 2 πŸ’¬ 1 πŸ“Œ 2