Sam Lewis, Ph.D.'s Avatar

Sam Lewis, Ph.D.

@samlewis

Assistant Professor in the UC Berkeley Department of Molecular and Cell Biology, mtDNA obsessed, mother to the Lord of Chaos, she/her, personal account, views do not reflect those of my employer. https://www.samlewis-phd.com/

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18.08.2023
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Latest posts by Sam Lewis, Ph.D. @samlewis

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On my way to DC and looking forward to this exciting mini-symposium! #ASBMB26

06.03.2026 21:59 πŸ‘ 9 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0
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Megan Doty et al discovered that myelin remains for weeks after cortical axons degenerate. We call the sheaths without an axon de-axoned myelin. During the slow, asynchronous, degeneration, microglia don't play a major role in clearing the axon or de-axoned myelin. www.science.org/doi/10.1126/...

06.03.2026 19:39 πŸ‘ 28 πŸ” 9 πŸ’¬ 1 πŸ“Œ 0
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Organelle-Targeted Laurdans Measure Heterogeneity in Subcellular Membranes and Their Responses to Saturated Lipid Stress - PubMed Organelles feature characteristic lipid compositions that lead to differences in membrane properties. In cells, membrane ordering and fluidity are commonly measured using the solvatochromic dye Laurdan, whose fluorescence is sensitive to lipid packing. As a general lipophilic dye, Laurdan stains all …

seen this? pubmed.ncbi.nlm.nih.gov/39069657/

25.02.2026 23:14 πŸ‘ 0 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Yes
bsky.app/profile/biot...

18.02.2026 20:37 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

No Kings includes Draft Kings

08.02.2026 23:49 πŸ‘ 26113 πŸ” 6102 πŸ’¬ 185 πŸ“Œ 110
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We are organizing a mini-symposium on "Membrane and Organelle Dynamics" at ASBMB 2026! #ASBMB @asbmb.bsky.social
@aydinlab.bsky.social and I have put together a fantastic lineup of speakers for Day 1 morning. Come learn about some cutting-edge research in the field.

07.02.2026 03:16 πŸ‘ 13 πŸ” 5 πŸ’¬ 0 πŸ“Œ 1

Thank you, Lorena! Happy to see this online 😁 πŸŽ‰

06.02.2026 19:41 πŸ‘ 3 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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Self-renewal of neuronal mitochondria through asymmetric division - preLights Neurons contain β€œhotspots” for mitochondrial biogenesis at distal branch points

Check out my first @prelights.bsky.social article, based on some great work done by Dr. Tejashree Waingankar & @samlewis.bsky.social at UC Berkeley πŸ”¬πŸ§¬πŸ§ 

prelights.biologists.com/highlights/s...

06.02.2026 18:22 πŸ‘ 9 πŸ” 6 πŸ’¬ 2 πŸ“Œ 1
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How does molecular valency shape condensate assembly and function? We used the CO2-fixing organelle in algaeβ€”the pyrenoidβ€”to find out… 🧡

Preprint here!:
www.biorxiv.org/content/10.6...

@cellarchlab.com @phaips.vd.st @biologyatyork.bsky.social
#Rubisco #PhaseSeparation #Condensates #Pyrenoid

30.01.2026 15:20 πŸ‘ 78 πŸ” 37 πŸ’¬ 1 πŸ“Œ 5

Thank you!

26.01.2026 15:02 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

@focalplane.bsky.social I recommend www.biorxiv.org/content/10.6...

23.01.2026 16:44 πŸ‘ 2 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0

I'm reading this now based on your recommendation, and it feels like listening to Bjork for the first time

18.01.2026 23:44 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

I found me!

15.01.2026 21:04 πŸ‘ 13 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

A lot of the time I would inject to guide them, as in "the authors chose to measure X to address their hypothesis; could they have measured something else instead? if they had measured Y, would that be a more direct test of their model or less direct, in your opinion?" etc, etc

14.01.2026 19:59 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

I was pretty nervous at first. But luckily I didn't monologue much; someone asks a question, and my answer leads to another question, and then a student chimes in because we're verging on some topic relevant to their dissertation, and then they're in a discussion amongst themselves!

14.01.2026 19:59 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0

Teaching was easier and more fun for me as well. This worked without too much prep because the class was small, but now I'm thinking about how to adapt some features to a class of 30+

I will definitely do this again!

14.01.2026 19:14 πŸ‘ 4 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0
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I taught my grad-level cell bio seminar using the Socratic method in the fall, and shockingly (to me), students loved it. No slides, just yapping. I assigned two research articles per week as the starting point, but we were mostly led by their questions

14.01.2026 19:14 πŸ‘ 19 πŸ” 1 πŸ’¬ 4 πŸ“Œ 0

sorry to hear, Uri

09.01.2026 22:08 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

I love this video of mitochondrial trafficking and POLG2-GFP in pLL neurons of live zebrafish larvae - from our awesome collaborator Katie Drerup @kdrerup.bsky.social at UW-Madison. She and her team are so talented!

09.01.2026 19:47 πŸ‘ 20 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

I don't see any mtDNA...?

08.01.2026 15:49 πŸ‘ 2 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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The cryo cyclical multiplexing expansion microscopy (Cy-ExM) preprint from
@seweryn-galecki.bsky.social , @kevin-dean.bsky.social et al is online.

20 targets across an entire cell. Mr. Snouty also joined the fun.

www.biorxiv.org/content/10.6...

02.01.2026 19:39 πŸ‘ 41 πŸ” 13 πŸ’¬ 1 πŸ“Œ 1

The Raven Scholar, by Antonia Hodgson
The Devils, by Joe Abercrombie
The Angel of the Crows, by Katherine Addison

29.12.2025 03:16 πŸ‘ 3 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0
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Self-renewal of neuronal mitochondria through asymmetric division Mitochondrial ATP production is essential for life. Mitochondrial function depends on the spatio-temporal coordination of nuclear and mitochondrial genome expression, yet how this coordination occurs ...

Congratulations to first-author Tejashree, and many thanks to our wonderful collaborators Diana Bautista and Katie Drerup! www.biorxiv.org/content/10.6...

18.12.2025 20:35 πŸ‘ 6 πŸ” 1 πŸ’¬ 2 πŸ“Œ 0
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Bottom line: peripheral sensory neurons pattern mitochondrial diversity using cell geometry!

By coupling mitochondrial self-renewal to axon branch points, neurons maintain energy and homeostasis from microns to meters! 10/10

18.12.2025 20:35 πŸ‘ 7 πŸ” 2 πŸ’¬ 1 πŸ“Œ 0
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We also show that axonal mitochondria almost never fuse with one another. That means once daughters differentiate, they keep their distinct identities instead of mixing back together 9/n

18.12.2025 20:35 πŸ‘ 4 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
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This asymmetric division actually *rejuvenates* the mother mitochondrion, boosting its membrane potential and keeping it dedicated to making new mitochondrial components 8/n

18.12.2025 20:35 πŸ‘ 4 πŸ” 2 πŸ’¬ 1 πŸ“Œ 0
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When these mitochondria divide, they do so asymmetrically. The β€œmother mitochondrion” keeps the mtDNA, while small, fast-moving daughters are shed with no mtDNA at all 7/n

18.12.2025 20:35 πŸ‘ 4 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
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🧬 At branch points, mitochondria actively copy and transcribe their mtDNA, stockpile mitochondrial mRNAs made in the nucleus, and sit next to sites where new proteins are being made 6/n

18.12.2025 20:35 πŸ‘ 6 πŸ” 3 πŸ’¬ 1 πŸ“Œ 0
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πŸ“ These branch-point mitochondria are packed with mtDNA. In contrast, half of mitochondria along the axon have NO mtDNA at all! 5/n

18.12.2025 20:35 πŸ‘ 4 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0
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πŸ”¬ Using high-resolution imaging in mouse DRG sensory neurons and zebrafish larvae, we discovered something unexpected: a special group of mitochondria parked right at axon branch points 4/n

18.12.2025 20:35 πŸ‘ 4 πŸ” 1 πŸ’¬ 1 πŸ“Œ 0