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@avorobieva

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22.11.2024
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Latest posts by @avorobieva

These results show how much we still need to learn about membrane protein folding & protein–lipid interactions. Proud of Giacomo’s persistence in pushing boundaries!

22.09.2025 21:00 👍 1 🔁 0 💬 0 📌 0

Surprisingly, mutations that would be catastrophic in soluble proteins (e.g. valine → proline) can actually yield well-folded, thermostable membrane proteins.

22.09.2025 21:00 👍 1 🔁 0 💬 1 📌 0

Negative design mutations (predicted to improve fitness but destabilizing the native state) can rescue poorly folding designs.

22.09.2025 21:00 👍 1 🔁 0 💬 1 📌 0

The classic “native state optimization” paradigm in de novo design drives our designs to aggregate, showing it’s not enough for membrane proteins.

22.09.2025 21:00 👍 1 🔁 0 💬 1 📌 0
Preview
Negative design enables cell-free expression and folding of designed transmembrane β-Barrels De novo design of membrane proteins (MPs) is a rapidly growing field with transformative potential for synthetic biology. Yet, progress has lagged behind that of soluble proteins, largely due to limit...

Very proud to share the first-author work from my first PhD student, Giacomo Pedrelli 🎉. He combined cell-free expression and computational design to explore how transmembrane β-barrels fold – and what that means for designing them from scratch.

www.biorxiv.org/content/10.1...

Key findings 🧵👇

22.09.2025 21:00 👍 2 🔁 0 💬 1 📌 0