Tomeu Viver

Uneven sequencing (coverage) depth can bias microbial intraspecies diversity estimates and how to account for it Abstract. An unbiased and accurate estimation of intraspecies diversity, i.e., the extent of genetic diversity within species (or microdiversity), is cruci

Happy to share our latest paper focused on the effect of uneven sequencing depth in intraspecies diversity estimates (nucleotide diversity and ANIr) using environmental and synthetic metagenomes

academic.oup.com/ismecommun/a...

Global dominance of Haloquadratum walsbyi by a single highly clonal genomovar with distinct gene content and viral cohorts from close relatives Abstract. Haloquadratum walsbyi is generally the dominant species in hypersaline ecosystems at salt saturation conditions. Here, we followed the dynamics o

Second paper of my PhD just published in The ISME Journal!🕺🕺

A single genomovar of Haloquadratum walsbyi, the most abundant species in hypersaline environments, globally dominates due to its higher fitness compared to close relatives

@isme-microbes.bsky.social
academic.oup.com/ismej/advanc...

Comparative metagenomics indicates metabolic niche differentiation of benthic and planktonic Woeseiaceae - Environmental Microbiome Background Benthic microbiomes exhibit remarkable temporal stability, contrasting with the dynamic, substrate-driven successions of bacterioplankton. Nonetheless, understanding their role in carbon cy...

Great news!! Our latest metagenomic study is out, exploring niche differentiation between benthic and planktonic microorganisms, with a special focus on the Woeseiaceae.
‪@cotoorellana.bsky.social‬ @mpimarinemicrobio.bsky.social‬

environmentalmicrobiome.biomedcentral.com/articles/10....