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@filipjaniak

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Latest posts by @filipjaniak

Muller glia (green) regulate local retinoic acid signalling to specialise photoreceptor outer segments (magenta)for high acuity visual function

Muller glia (green) regulate local retinoic acid signalling to specialise photoreceptor outer segments (magenta)for high acuity visual function

Excited to share our new manuscript from the Yoshimatsu and MacDonald labs. www.biorxiv.org/content/10.6.... We found that my favourite glial cells can regulate local retinoic acid signalling to specialise cone photoreceptors for high acuity visual function.

03.03.2026 16:20 👍 34 🔁 11 💬 1 📌 1

Happy to see how our collab. paper on the origin of the vertebrate eye is tickling the public interest. Our ongoing shuffle from systems neuro to evo-neuro over recent years continues to be a delight! We are supported by various funders, but I want to point out one in particular: @leverhulme.ac.uk

28.02.2026 10:06 👍 9 🔁 2 💬 1 📌 0
History-dependent ephaptic interactions in paired olfactory receptor neurons Olfactory sensing begins with the transduction of odors into receptor currents on the dendrites of olfactory receptor neurons (ORNs). In insects and many other arthropods, ORNs are grouped stereotypically in hair-like sensilla on the surface of olfactory organs, enabling mutual inhibition through non-synaptic 'ephaptic' interactions (NSIs). Given the electrical, and therefore virtually instantaneous, nature of NSIs, it has been hypothesized that they contribute to processing fast temporal elements of mixed odor plumes. Here, we present single sensillum recordings and computational modeling that characterize NSIs during short offset dual-odor stimulations in the olfactory sensilla of adult female Drosophila melanogaster. We find in the experiments that the magnitude of inhibition between co-housed ORNs cannot be predicted by their instantaneous activity (firing rate) alone. It is adaptation-dependent, with strong effects only occurring when the inhibited ORN is adapted. This limits the usefulness of NSIs for fast odor processing when ORNs lack time to adapt. We reproduced the observed phenomena in a computational model and use this model to explain how the adaptation-dependence of NSI-mediated inhibition arises from nonlinearities in neural responses. We conclude that NSIs are unlikely to support the encoding of fast temporal dynamics in mixed odor stimuli, instead contributing to slower peripheral processing, supporting roles such as novelty detection. More broadly, we demonstrate how the nonlinear interactions of fairly simple electrical components lead to non-intuitive results, offering insight into the longstanding debate around ephaptic interactions in other systems, such as the mammalian CNS. ### Competing Interest Statement The authors have declared no competing interest. Leverhulme Trust, https://ror.org/012mzw131, RPG-2019-232 Engineering and Physical Sciences Research Council, https://ror.org/0439y7842, EP/P006094/1, EP/S030964/1

Happy to share our preprint on ephaptic interactions between olfactory receptor neurons in Drosophila by Lydia Ellison.
doi.org/10.64898/202...
We set out to see how near-instantaneous electrical interactions are good for processing tiny odour onset delays, only to find that they weren't.

27.01.2026 20:24 👍 5 🔁 3 💬 1 📌 0

💎 New Publication Alert: Next-Generation Calibration Materials
We propose fluorescent nanodiamonds as a superior alternative to standard beads for calibrating two-photon systems.
Check out: www.biorxiv.org/content/10.6...
#Microscopy #Science #Innovation #Photonics #AcademicPublishing

14.01.2026 13:07 👍 1 🔁 1 💬 0 📌 0

10/10 Big thanks to all co-authors for the teamwork on this study @neurofishh.bsky.social, @mforst.bsky.social, Jakub Czubek and Malgorzata Szczerska

Funding support from @wellcometrust.bsky.social, @erc.europa.eu, @ukri.org, @hfspo.bsky.social, @leverhulme.ac.uk and Gdansk University of Technology

14.01.2026 15:28 👍 2 🔁 0 💬 0 📌 0

9/10 Take-home:
Nanodiamond phantoms provide photostable, tissue-relevant, and reproducible PSF calibration, enabling meaningful cross-platform comparison in two-photon microscopy.

We currently have a limited number of samples available. Feel free to contact me (DMs or email).

14.01.2026 15:28 👍 0 🔁 0 💬 1 📌 0
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8/10 Nanodiamonds exhibit stable two-photon fluorescence across excitation wavelengths from 800 to 1040 nm, confirming efficient and broadband excitation suitable for multi-wavelength imaging.

14.01.2026 15:28 👍 1 🔁 0 💬 1 📌 0
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7/10 With increasing two-photon excitation power, fluorescent beads show saturation and shape distortion, while nanodiamonds maintain stable morphology and consistent FWHM values, demonstrating resistance to saturation and photobleaching.

14.01.2026 15:28 👍 0 🔁 0 💬 1 📌 0
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6/10 PSFs broaden significantly between shallow (~50 µm) and deep (~700 µm) imaging depths in nanodiamond phantoms, mirroring depth-dependent degradation observed in vivo and contrasting with agarose phantoms.

14.01.2026 15:28 👍 0 🔁 0 💬 1 📌 0
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5/10 Refractive index measurements at 589 nm and 1050 nm show that nanodiamond phantoms align closely with RI estimates from brain tissue across common neuroscience model organisms, unlike water or agarose.

14.01.2026 15:28 👍 1 🔁 0 💬 1 📌 0
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4/10 Compared to agarose–bead phantoms, nanodiamond phantoms exhibit optical scattering and structural heterogeneity that more closely resemble real brain tissue.

14.01.2026 15:28 👍 0 🔁 0 💬 1 📌 0
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3/10 Two-photon PSFs measured with nanodiamonds and fluorescent beads are statistically indistinguishable in both diffraction-limited and non-telecentric (nTC) configurations.

14.01.2026 15:28 👍 0 🔁 0 💬 1 📌 0
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2/10 SEM reveals heterogeneous nanodiamond aggregates with a substantial fraction below 200 nm, comparable to standard fluorescent beads.
Confocal stacks show bright punctate emitters throughout the gel, confirming fluorescence is intrinsic to nanodiamonds (NV centres).

14.01.2026 15:28 👍 0 🔁 0 💬 1 📌 0
Nanodiamonds for spatial resolution benchmarking in two-photon microscopy Reliable and reproducible measurement of spatial resolution is essential for validating and comparing the performance of two-photon microscopy systems. We present fluorescent nanodiamonds as robust, photostable, reusable, and biocompatible probes for benchmarking spatial resolution. Owing to their nanoscale dimensions and stable fluorescence, nanodiamonds act as near-ideal point-like emitters, enabling accurate characterisation of the point spread function across varying imaging conditions. We demonstrate that nanodiamond-based phantoms serve as a reliable alternative to conventional fluorescent beads embedded in agarose, while at the same time offering advantages in stability and optical properties. Our results position nanodiamond phantoms as a next-generation calibration material that bridges ease of use and reproducibility, advancing quantitative imaging and cross-platform comparability in modern fluorescence microscopy. ### Competing Interest Statement The authors have declared no competing interest. Wellcome Trust, https://ror.org/029chgv08, Investigator Award in Science 220277/Z20/Z European Research Council, https://ror.org/0472cxd90, ERC-StG “NeuroVisEco” 677687, ERC AdG “Cones4Action” covered under the UK’s EPSRC guarantee scheme EP/Z533981/1 UK Research and Innovation, https://ror.org/001aqnf71, BBSRC, BB/R014817/1, BBSRC, BB/W013509/1 International Human Frontier Science Program Organization, https://ror.org/02ebx7v45, RGP001/2025 Leverhulme Trust, https://ror.org/012mzw131, PLP-2017-005, RPG-2021-026, RPG-2-23-042 Lister Institute of Preventive Medicine Gdańsk University of Technology, https://ror.org/006x4sc24, Nobelium DEC-4/1/2024/IDUB/I.1a/No, Platinum 1/1/2025/IDUB/I.1B/Pt

1/10 New preprint on bioRxiv
Nanodiamonds for spatial resolution benchmarking in two-photon microscopy

We introduce nanodiamond-based phantoms as a robust, reusable alternative to bead–agarose samples for PSF calibration.

www.biorxiv.org/content/10.6...

14.01.2026 15:28 👍 6 🔁 5 💬 1 📌 0
Preview
Ultra-wide-field, deep, adaptive two-photon microscopy Observing the activity patterns of large neural populations throughout the brain is essential for understanding brain function. However, capturing neural interactions across widely distributed brain r...

A new version of our 2p mesoscope paper is up on biorxiv:
Yang et al, Ultra-wide-field, deep, adaptive two-photon microscopy.
www.biorxiv.org/content/10.1...

10.01.2026 10:19 👍 16 🔁 4 💬 0 📌 0

"These results show that spontaneous activity in the vertebrate brain is highly stereotyped at the level of functional cell assemblies and can be reliably captured through a common latent code."

New work from Volker Bormuth Lab @sorbonne-universite.fr 🐟🧠

12.01.2026 13:34 👍 11 🔁 2 💬 0 📌 0