Oh! This looks promising!
Thanks, Brant
16.01.2025 23:17
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Oh! This looks promising!
Thanks, Brant
I am using arrays, but wanted to see about two arrays in one sbatch. For example, do something across all individuals, then for all scaffolds, where n_inds ≠ n_scaffolds.
Running separate arrays is working, just not as efficiently as I’d like haha 😅 thanks tho!
I would really appreciate any code you’re willing to share! Ready to risk mixed success at this point haha 😂
My UHawaii email, please & thank you!!! 🙏🏼
My first thought was Snakemake. Any thoughts @vsbuffalo.bsky.social ?
Can you run sequential slurm arrays with one job submission? E.g., make bam files for all inds, then make individual VCFs when bam step is complete.
I currently do this with separate job submissions, but would like to combine into one job submission.
Thanks! #bioinformatics
I SEE WHAT YOU DID THERE. A LYCAN SAY IS: 😎
Whoa! I love this one!
One of the top birds (imho). Love the illustration too 🤩
Loved that Walkman 💞
Phylogenetics methods announcement: piqtree is out! It exposes selected IQ-TREE2 capabilities within Python, using the cogent3 library as the interface, better enabling pipelines. piqtree is an addition to, not a replacement of, IQ-TREE2.
Full announcement at github.com/iqtree/piqtr...
If you hate statistics like I do, then you'll love my free lectures. Putting science before statistics, 20 lectures from basics of inference & causal modeling to multilevel models & dynamic state space models. It's all free, made with love and sympathy. 🧪 #stats www.youtube.com/playlist?lis...
Trump says he's wants to privatize USPS because it's "unprofitable".
Reminder that the Post Office isn't a for-profit enterprise: it's a public service that guarantees everyone in America reliable, affordable, and universal mail service.
Soooo close tho 🫠😅😂
Gahhhhhhh!!! ☺️🥳🤩
This is an exciting start to the week 😎
Such great news!! Congrats 🥳🥂
People: don’t you just get a job when you’re a doctor…? You can just be a professor, right?
Me: 👇🏼
A black and white painting on a bright red background of the Finger Blasters - the protagonists of Science and Sorceries' Witness to Ruin campiagn. Muck in an angry half orc swinging a sword over her head. Blirta is a small balf elf with vaguely pubk clothing, firing an energy beam from her left eye. Nimbo is a tall firbolg wearing scalemail with lightning crackling from his extended hand. Em is an Uncina - a snow leopard person - firing magic missiles from a wand grasped in their tail.
Whoop whoop back to 1000 followers, so you know what I haven't done in ages?
ART GIVEAWAY!
If you follow me and reskeet this post and at 5pm next I'll do either a creature illustration or a character bust of your choice!
*Note: Bot, AI, NFT, scraper etc accounts will disqualified disqualified
We have a postdoc position available in the lab on post-copulatory barriers in hybridizing crickets. We have genomic data ready to be analyzed and crickets ready for experiments. This is a great collaborative group and a study system with a lot of potential for new projects. Join us!
I recently saw a [conservation focused] talk discussing how a single SNP confers resistance to a toxin in an endangered species. And I thought “how cool!” - I did not think about how a one SNP could also confer a more harmful result 😅🫠
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😂😂
Shout out to your 5yo and the Bluesky science community for my fun fact of the day! 🤯😎🤩
Annual salary vs MIT living wage, only two points fall above the 1:1 line and pay a living wage.
After lots of delay - we just updated the MIT living wage in our stipend database and we are back to only two points above the line! See more: rhettrautsaw.app/shiny/Biolog...
#PhDStipend #Biology @reptilerhett.bsky.social
Learn something new every day! 🤪😂
best Mimulus, for sure
I dig the knives 🔪 good lookin collection! 😎
How much more can he take from us
Yoooo!! I am glad to see you here, mate. I was off the socials for a while too, but so far this place has been a mood booster rather than drainer (we’ll see how long that lasts lol but for now it’s nice) 👍🏼
I am, admittedly, not a population geneticist by training. And so I distinctly remember the aha moment where I realized:
If you filter everything that’s “weird” then nothing is [the good kind of] weird 🙃🫠
