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Xabier Lopez-Alforja

@xabilopalf

Marine Microbial Ecology ๐Ÿ”ฌ at the @icmcsic.bsky.social ๐Ÿ’ป ๐Ÿงฌ Virus Bioinformatics ๐Ÿ“Š Omic-data Analysis Resque Diver | Night & Nitrox diver || (he/him)

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20.11.2024
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Latest posts by Xabier Lopez-Alforja @xabilopalf

tot IB3 | Nautilus | Capรญtol 20251227210400 Capรญtol 20251227210400 a la carta del programa Nautilus als servei de contingut a la carta d'IB3

Here is the interview with @ib3oficial.bsky.social that they did with me about our latest article on the decline of viral abundance in the Mediterranean.

What's happening to coastal viral communities? How is climate change affecting them?

Starts in the min 23.30

totib3.org/play/radio/n...

13.01.2026 10:04 ๐Ÿ‘ 0 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Single-particle genomics uncovers abundant non-canonical marine viruses from nanolitre volumes - Nature Microbiology Environmental micro-compartment genomics provides efficient and high-throughput single-particle DNA sequencing that captures overlooked members of microbial communities.

#NewResearch

Single-particle genomics uncovers abundant non-canonical marine viruses from nanolitre volumes

@rstepanauskas.bsky.social & co

#microsky

www.nature.com/articles/s41...

07.11.2025 11:19 ๐Ÿ‘ 10 ๐Ÿ” 7 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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๐Ÿ“ขJoin us for the next ECR #Viromics Webinar:
"Untangle the complexity of the virosphere using single-cell RNA-sequencing"
โ€๐ŸŽ™๏ธ Amir Fromm | Weizmann Institute of Science, Israel
๐Ÿ—“๏ธ 12 November 2025, 4 PM CET
๐Ÿ“ Online | Zoom (register for login details)
๐Ÿ‘‰ coms.osu.edu/webinars/ecr...

07.11.2025 09:43 ๐Ÿ‘ 5 ๐Ÿ” 1 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
Unprecedented decline in marine viruses in the western Mediterranean linked to climate change revealed | Institut de Ciรจncies del Mar A team led by the Institut de Ciรจncies del Mar (ICM-CSIC) has described a sustained and unprecedented decrease in the abundance of marine viruses in the northwestern Mediterranean over the last two de...

A press note on our latest study has been released (select the language in the web)

๐Ÿ“‰ An unprecedented decline in marine viruses in the Western Mediterranean, based on over 20 years of data from the Blanes Microbial Observatory.

๐Ÿ—ž๏ธ Read the full press release here:

www.icm.csic.es/en/news/unpr...

04.11.2025 10:16 ๐Ÿ‘ 1 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

Same patterns to those we've been observing in the mediterranean sea! Decrease in the overalll chlorophyll-a values

21.10.2025 13:40 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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What a week in @same18-bcn.bsky.social in Barcelona! ๐Ÿ”ฌ๐Ÿงฌ

๐ŸŒŠ๐Ÿฆ Presented my work on giant viruses & virophages in marine protists - even in the Hangover session!

๐Ÿฅ‚Great to have a moment to answer brilliant questions and make new connections ๐ŸŒŠ

#giantvirus #virophages #SAME18 #AquaticMicrobiology

13.10.2025 09:20 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Complex transcriptional regulations of a hyperparasitic quadripartite system in giant viruses infecting protists - Nature Communications Giant viruses infecting protists can be hyperparasitized by virophages, and carry mobile DNA elements called transpovirons. Here, Bessenay et al. analyze the transcriptional program of this complex qu...

www.nature.com/articles/s41...

30.11.2024 16:16 ๐Ÿ‘ 21 ๐Ÿ” 10 ๐Ÿ’ฌ 3 ๐Ÿ“Œ 1
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GitHub - xabilopalf/GAMMANN-Vir: GAMM and ANN modelling for Viral Abundance Time Series GAMM and ANN modelling for Viral Abundance Time Series - xabilopalf/GAMMANN-Vir

๐Ÿ†The GAMANN-vir code is now open-source for the community!๐Ÿ†

This tool was designed to analyze complex time series and handle intricate interactions. GAMANN-vir strategically combines GAMMs (trends and seasonality) and Neural Networks (ANNs) (robust predictive modeling).

github.com/xabilopalf/G...

09.10.2025 15:39 ๐Ÿ‘ 5 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Long-term decline of marine viruses associated with warming and oligotrophication at a NW Mediterranean coastal site Abstract. Viruses play key roles in controlling microbial abundance and community composition, nutrient cycling, and productivity in marine systems. Rising

#NewPaperAlert in @isme-microbes.bsky.social

๐Ÿ”ฌ 18 yrs of Blanes Bay surface water data show warming & oligotrophication reshape viral communities. @icmcsic.bsky.social

๐Ÿ“‰ Decline in viruses, microbes & phytoplankton.
๐ŸŒก๏ธ Linked to temp rise, transparency & nutrient loss.

doi.org/10.1093/isme...

09.10.2025 14:52 ๐Ÿ‘ 3 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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Group pic SAME18!

01.10.2025 17:56 ๐Ÿ‘ 39 ๐Ÿ” 20 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 2
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Arqueologies queer (Presencial) Gรจnere, sexualitat i materialitats des de la prehistรฒria fins a la modernitat

@putomikel.bsky.social i Enrique Moral de Eusebio ens parlaran dโ€™arqueologia queer; entenent-la no nomรฉs com un nou enfocament del passat, sinรณ tambรฉ com una interpelยทlaciรณ als discursos que hem produรฏt histรฒricament i al lloc des dโ€™on sโ€™han enunciat.

www.instituthumanitats.org/ca/cursos/ar...

05.12.2024 10:49 ๐Ÿ‘ 37 ๐Ÿ” 9 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 0