Amirali Aghazadeh

Excited to announce our paper, SHAP zero, has been accepted into NeurIPS 2025!

SHAP zero takes the first steps toward extracting biological insights at scale from machine learning models by amortizing the cost of explanations across large-scale biological datasets.

Sparse Autoencoders for Low-$N$ Protein Function Prediction and Design Predicting protein function from amino acid sequence remains a central challenge in data-scarce (low-$N$) regimes, limiting machine learning-guided protein design when only small amounts of assay-labe...

Our new work on the utility of SAEs in low-N protein function prediction and design arxiv.org/abs/2508.185...

🚀🚀🚀 Super excited that our Agentic AI for Origins of Life is covered in a story in journal Nature. #ai #astroagents

Research involves day science and night science, requiring you to become good at both. Day science proceeds in logical steps and specializes in hypothesis testing, but to generate new ideas we pop out to the creative night science world, where leaps among ideas are made possible.

A great conclusion to my Generative and Geometric AI class at GT with several interesting projects and posters. #GenAI

Great read on ruggedness of protein fitness landscapes

Here’s the updated Computational Biology Starter Pack! Let me know if you'd like to be included.

go.bsky.app/QVPoZXp

I will be happy to be on the list.

I am new to this area but happy to be included. Thanks.

Happy to be on the list, thanks

I must admit that this annotated Nature abstract remains a useful recipe for constructing a summary paragraph. I show it to my students every time we get started.

Report: Every dollar of NIH research funding doubles in economic returns Research funded by the National Institutes of Health (NIH) generated $2.46 in economic activity for every $1 of funding in 2023, a total of $92.9 billion, according to an

Research funded by NIH generated $2.46 in economic activity for every $1 of funding in 2023 [a total of $92.9 billion]

www.fiercebiotech.com/research/rep...

Action Intent Links | Bluesky Authors, websites, and apps can use action intent links to implement "Share on Bluesky" buttons, or similar in-app actions. Logged-in users will be directed to the corresponding action view in the Blu...

We strongly suggest that academic publishers and other platforms that host research rapidly implement a Share to Bluesky button for their articles. Here's how:

docs.bsky.app/docs/advance...

#AcademicSky #HigherEd #Altmetrics

This pack is now up to 67 people, broadly in AI and advanced data for science. Follow along, and forward me others who should be there! 🦋🦋

go.bsky.app/JeFdryY

Happy to be added; thanks

I would be happy to be added, thanks.

Happy to be on the list :)

I'm looking forward to engaging on #chemsky. Missed #chemtwitter!