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Alex Henderson

@alexhenderson.info

Open Research Fellow at University of Manchester, UK (he/him). chemometrics | research data management | linked data https://alexhenderson.info

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17.12.2023
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Latest posts by Alex Henderson @alexhenderson.info

@plosbiology.org is formalizing its long‑standing practice of asking authors to share research code, introducing a mandatory #code‑sharing policy and clarifying what is meant by code sharing.

Learn more and find guidance on best practice: plos.io/4reyX3v

09.03.2026 17:55 👍 58 🔁 22 💬 1 📌 2
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Formalizing our commitment to code sharing In support of open science, PLOS Biology routinely asks authors to openly share their research code before publication. We are now formalizing this practice with a mandatory code sharing policy and…

In support of #OpenScience, we routinely ask authors to openly share their #research #code before publication.

We are now formalizing this practice with a mandatory #CodeSharing policy and clarifying what we mean by code sharing.

27.02.2026 20:30 👍 48 🔁 25 💬 1 📌 2
This infographic titled "The Women of the Periodic Table" highlights ten women and their contributions to element discovery. A central periodic table marks specific elements in green and orange, with lines connecting them to names and portraits. Featured scientists include Marie Curie (polonium, radium), Marguerite Perey (francium), and Clarice Phelps (tennessine). It traces history from early pioneers like Harriet Brooks to modern teams including Dawn Shaughnessy and Darleane Hoffman.

This infographic titled "The Women of the Periodic Table" highlights ten women and their contributions to element discovery. A central periodic table marks specific elements in green and orange, with lines connecting them to names and portraits. Featured scientists include Marie Curie (polonium, radium), Marguerite Perey (francium), and Clarice Phelps (tennessine). It traces history from early pioneers like Harriet Brooks to modern teams including Dawn Shaughnessy and Darleane Hoffman.

Today is the #InternationalDayOfWomenAndGirlsInScience 👩‍🔬 This graphic highlights women of the periodic table, the elements they discovered, and the two elements named after women.

Plenty more graphics on women in chemistry here: www.compoundchem.com/category/wom...

#ChemSky 🧪

11.02.2026 16:50 👍 108 🔁 66 💬 3 📌 2
Home

Abstract deadline for @springscix2026.bsky.social coming up on Friday!

Registration now open...

Some great keynote speakers to add to the great plenaries!

Check out the website here: springscix.org

11.02.2026 16:40 👍 0 🔁 1 💬 1 📌 0
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📢Abstract deadline for SPEC 2026 is February 16!!

Registration now open

Visit www.spec2026.org for everything you need to know!

See you in Nashville!

11.02.2026 16:52 👍 0 🔁 1 💬 0 📌 0
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Writing Alt Text for Data Visualization How do you write text that conveys the whole meaning of a visualization? You probably can’t. But that doesn’t mean that you shouldn’t try

Many struggle with writing alt text for charts and other other data visualizations. Amy Cesal's "Writing Alt Text for Data Visualization" hammers home the importance of explaining the chart type, the type of data, and the reason for the chart.

medium.com/nightingale/...

16.12.2025 15:03 👍 31 🔁 19 💬 0 📌 1
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I’ve spent the past week refining my free e-book, Applied Geostatistics in Python 📚💻

glossary 📖, illustrations 🎨, & descriptions, 32 chapters, downloadable Python workflows 🐍!

My university content in a more accessible format to reach a broader audience 🌍 🚀

geostatsguy.github.io/GeostatsPyDe...

21.12.2024 15:56 👍 5 🔁 2 💬 0 📌 1

[via @FrnkNlsn on X]

Book PDF (730 pages) :

"High-Dimensional Data Analysis with Low-Dimensional Models" by Wright & Ma

👉PDF: book-wright-ma.github.io

Preface by E. Candes

15.11.2025 23:47 👍 0 🔁 0 💬 0 📌 0
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OWLAPY: A Pythonic Framework for OWL Ontology Engineering In this paper, we introduce OWLAPY, a comprehensive Python framework for OWL ontology engineering. OWLAPY streamlines the creation, modification, and serialization of OWL 2 ontologies. It uniquely int...

[from DiceResearch on X]
"OWLAPY: A Pythonic Framework for OWL Ontology Engineering"
👉Check it out: arxiv.org/abs/2511.08232
🔎 OWLAPY is a comprehensive Python framework for OWL ontology engineering, already over 50k downloads!

14.11.2025 21:08 👍 2 🔁 0 💬 0 📌 0
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Aliee Group - Cancer Research UK Cambridge Institute Explain. Predict. Outsmart cancer.

Looking for a PhD/postdoc position in Cambridge UK in comp bio? Check out Hana Aliee's new lab at CRUK: www.cruk.cam.ac.uk/research-gro...

30.10.2025 20:38 👍 6 🔁 3 💬 0 📌 0
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regex.search - Carlo Lepelaars Using regex.search for simple string parsing. `regex` is a superset of `re` with additional functionality and more thorough Unicode support.

Struggling with Python `re`? regex is a superset of re with additional functionality and more thorough Unicode support. It is very powerful and still kind of an open secret. When I saw
@howard.fm explain this I just had to write about it!

Today I Learned:
carlo.ai/til/regex-se...

18.03.2025 14:52 👍 19 🔁 3 💬 1 📌 0
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Thanks to @nealasher.bsky.social in "The Soldier"

18.10.2025 16:31 👍 2 🔁 1 💬 0 📌 0
Research Fellow (Health Informatics):Oxford Road Join our world-leading group, the eScience Lab (esciencelab.org.uk) at The University of Manchester, where innovation meets impact in data-driven life science research. We are seeking a talented and motivated Research Fellow to lead work within the TREvolution project—an exciting DARE UK initiative focused on advancing Trusted Research Environments (TREs) for multi-site, AI-enabled health data analytics.

📢 New job positions in Heath Informatics @manchester.ac.uk
www.jobs.manchester.ac.uk/Job/JobDetai...
Lots of RO-Crate, #metadata, #FAIR and you get to join the excellent eScience Lab team!

14.10.2025 10:46 👍 0 🔁 0 💬 0 📌 0
The first automobile theft in the city has been reported. That shows that people are beginning to have confidence in the ability of the machines to travel into the next state without breaking down.
--Minneapolis Daily Times, 31 Mar 1903

The first automobile theft in the city has been reported. That shows that people are beginning to have confidence in the ability of the machines to travel into the next state without breaking down. --Minneapolis Daily Times, 31 Mar 1903

Minneapolis, 1903

09.10.2025 19:47 👍 102 🔁 18 💬 2 📌 1

Well, the UN are up for Open Science. Are you?

07.10.2025 19:16 👍 0 🔁 1 💬 1 📌 0
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🔬New Methods and Protocols published!

The authors present a methodology for deep learning-based segmentation by transforming high-quality ex situ laboratory data to train models for segmentation of in situ synchrotron data, demonstrated through a metal oxide dissolution study.

06.10.2025 11:18 👍 1 🔁 1 💬 1 📌 0
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Scientific data underpins progress across all sectors. A national governance framework ensures data is managed and shared responsibly, benefiting Canadians now and for generations.

Read our report: science.gc.ca/site/science...

#DataGovernance #Innovation #Canada #OpenScience #AI

03.10.2025 15:57 👍 5 🔁 4 💬 0 📌 0
Open Source for Raman Spectroscopy Data Harmonization — H2020 CHARISMA Authors: Georgi Georgiev, Dirk Lelinger, Luchesar Iliev, Vedrin Jeliazkov, Miguel Banares, Raquel Portela, Nina Jeliazkova Raman spectroscopy is becoming a key technology used in the research and d...

🧬💻 CHARISMA’s latest publication introduces a powerful open-source #Python package designed to harmonize Raman spectroscopy data across instruments and labs.

📖 Read the article here: h2020charisma.eu/publications...

#Ramanspectroscopy #Ramantechniques #calibration

03.10.2025 16:06 👍 0 🔁 1 💬 0 📌 0
An Interlaboratory Study to Minimize Wavelength Calibration Uncertainty Due to Peak Fitting of Reference Material Spectra in Raman Spectroscopy — H2020 CHARISMA Authors: Dirk Lellinger, James Thomson, Nicolas Coca-Lopez, Afroditi Ntziouni, Nikolaos Nikoloudakis, María Fernández-Álvarez, Nina Jeliazkova, Miguel A Bañares,&n...

📢✨ CHARISMA’s latest publication explores how #peakfitting of reference material #spectra can enhance reproducibility and precision across labs.

📖 Read it here: h2020charisma.eu/publications...

#Ramanspectroscopy #Ramantechniques #ramaneffect

03.10.2025 16:05 👍 0 🔁 1 💬 0 📌 0
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What’s in a README? Why your README matters, and how to create the best one possible | Dryad news README files are a simple but crucial component of data sharing. A README provides the context and detail to understand and reuse data, maximizing the benefits of open data — improved understanding, r...

What’s in a README? Why your README matters, and how to create the best one possible.

blog.datadryad.org/2025/09/09/w...
via @datadryad.bsky.social
HT to Clare Liggins @uomlibrary.bsky.social

03.10.2025 15:54 👍 1 🔁 0 💬 0 📌 0
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New from @appliedspec.bsky.social!

Understanding and Employing (Non-)Linearities in Attenuated Total Reflection #ATR #Spectroscopy

Read the full article here: https://loom.ly/9W4GloQ

#SAS #SpecTacularScience #AppliedSpectroscopy

29.09.2025 06:06 👍 1 🔁 1 💬 0 📌 0
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🚀 Excited to share scPortrait! Led by Sophia Mädler & Niklas Schmacke w/ the Mann lab — a new @scverse tool for standardized single-cell image data. Enables ML-ready extraction, >1B cell processing, cross-omics, & cancer macrophage insights.
🔗 www.biorxiv.org/content/10.1...

28.09.2025 17:50 👍 54 🔁 25 💬 0 📌 1

So #AVS71 was a blast! 🚀
But now I'm stranded in Charlotte without passport or laptop, which is somewhat less fun 😣
Time to start writing my memoirs perhaps... 🤔

26.09.2025 17:54 👍 0 🔁 0 💬 0 📌 0
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Congratulations Ian!

24.09.2025 23:23 👍 0 🔁 0 💬 0 📌 0
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Alex Shard discussing the "Bitter Pill of Metrology" at #avs71

22.09.2025 20:17 👍 0 🔁 0 💬 0 📌 0
Rain at Manchester Airport.

Rain at Manchester Airport.

Off to AVS-71 for a fun week of science. Leaving rainy Manchester behind for the 30C of Charlotte, North Carolina. Tough decision!

20.09.2025 10:54 👍 1 🔁 0 💬 0 📌 0
Inkscape for scientists 1 - simple shapes
Inkscape for scientists 1 - simple shapes YouTube video by Kevin Bonham

More than a decade ago, I started making tutorial videos on how to use Adobe illustrator, targeted at scientists that needed to make figures and cartoons for talks or papers.

Now I'm getting started again, but this time with the free and open source vector editor Inkscape 🧪

youtu.be/E7n6SDni28Q

16.09.2025 15:50 👍 39 🔁 7 💬 2 📌 0
Flyer for the SPEC2026 conference

Flyer for the SPEC2026 conference

📢 SAVE THE DATE 📢

SPEC 2026, the 14th International Conference on Clinical Spectroscopy, will be held in Nashville USA, May 16-21 2026.

More details coming soon...

For sponsorship opportunities, contact Anita Mahadevan-Jansen, Andrea Locke, or Matt Baker at vbc@vanderbilt.edu

18.09.2025 11:23 👍 3 🔁 3 💬 0 📌 0
Laptop and name badge showing International Standards Organisation logo withe name Alex Henderson, and title Data Management and Treatment.

Laptop and name badge showing International Standards Organisation logo withe name Alex Henderson, and title Data Management and Treatment.

Getting ready to chair another ISO meeting at DIN, here in Berlin. Some important things to discuss and updates to hear. Looking forward to it!

13.09.2025 15:49 👍 2 🔁 0 💬 0 📌 0