hpc.social on BlueSky

Detect MPI with Singularity by kinow · Pull Request #2216 · common-workflow-language/cwltool @mr-c, I started some tests yesterday, and completed them today after work. Once I managed to run the workflow on my machine reproducing the error we have on HPCs, debugging it showed that the chan...

Successfully ran cwltool on BSC MareNostrum5 with MPI, with and without Singularity 🎉🤖 github.com/common-workf... #opensource #cwl #hpc

Excited to share this preprint that describes my latest work on using GPUs to accelerate processing of RNA-seq data.

The title says it all: "RNA-seq analysis in seconds using GPUs" now on biorxiv www.biorxiv.org/content/10.6... and github github.com/pachterlab/k...

Figure 1 shows they key result

The #Snakemake plugin for #SLURM on #HPC clusters will support JobArrays, soon:

1057691_1 2dcf44cc-+ rule_map_reads_wild+ 32 COMPLETED 0:0
1057691_2 2dcf44cc-+ 32 RUNNING 0:0
1057691_3 2dcf44cc-+ 32 RUNNING 0:0
1057691_4 2dcf44cc-+ 32 RUNNING 0:0
1057691_5 2dcf44cc-+ 32 RUNNING 0:0
1057691_6 […]

The RSECon26 Call for Submissions is open! Share the tools you build and the RSE practices you are advancing. We welcome talks, workshops, and posters from all domains. Check the guidelines and submit your proposals today! Link: rsecon26.society-rse.org/calls/submis... #RSECon26

Just published in JOSS: 'MADSci: A modular Python-based framework to enable autonomous science' https://doi.org/10.21105/joss.09416

Building a sustainable #EUJapan partnership in #HPC and #AI takes vision and strategic dialogue.
#HANAMI Project Coordinator France Boillod-Cerneux and Lead Strategist Pihla Kauranen share how long-term cooperation is designed and sustained.

🔗 shorturl.at/GkLLj

@cea.fr @eurohpc-ju.bsky.social

🚀 Ready to execute scalable codes on #MareNostrum5?
Advanced users and research teams will work on a substantial fraction of the system with #GPU partition access ( #AI /ML, #LLMs, large-scale simulations).

🗓️ April 22-24
🔗 Register until March 15: shorturl.at/Laq6Y

@bsc-cns.bsky.social
#workshop

🎉 📣 #HPCTRAIN project offers professional #traineeships across Europe
👩‍💻 Hands-on experience
🤝 #networking opportunities
💡 technical + transversal #skills

@eurohpc-ju.bsky.social is investing in skills powering Europe’s future technologies.
🔗More details 👉link.europa.eu/WwNwGF

Call for Submissions and Reviewers Webinar Time: 10th of March 10:00am (GMT) The RSECon26 programme committee are hosting a webinar to introduce this year’s committee, submissions and reviewers call. Please join us to find out more and ask…

Want to learn more? The RSECon26 programme committee is hosting a webinar on March 10th to introduce the team and discuss the submissions and reviewer calls. Register here: forms.gle/hncAeUivJ7oW... #RSECon26

RSECon26 season is open! Our Call for Submissions, Call for Reviewers, and Open Call for Emerging Voices are all live today. Find all details and links on our website rsecon26.society-rse.org/calls/. #RSECon26

The IWOMP 2026 Call for Papers is open!

Submit your talk for IWOMP 2026, which will be held at the Austrian Scientific Computing (ASC) at TU Wien in Vienna (Austria) - October 7–9, 2026.

We look forward to seeing you there! www.iwomp.org/call-for-pap...
#IWOMP26 #OpenMP #HPC #parallel #programming

Welcome to HPC Hearts & Minds, our video podcast where we talk to the people behind some of today’s most fascinating discoveries.

This series is all about finding out the real-world impact that comes from using this large-scale computing:
pawsey.org.au/podcast

#NPC #ResearchImpact #Supercomputing

11th National Climate Dynamics Workshop UK Climate Dynamics Workshops are annual in-person events aiming to promote collaboration amongst the UK academic sector and the Met Office.

Registration now open for the 11th UK National Climate Dynamics Workshop.

22-24 June at University of Reading. Abstract deadline is 30 April.

www.rmets.org/event/11th-n...

Simulating a 40-bit quantum computer

🌐Check out the Supercomputing in Europe episode on simulating a quantum computer. Matthias Christandl shares how his team simulated a 40-qubit quantum algorithm on an AI supercomputer.

🎧Spotify: open.spotify.com/episode/1SSs...
🎧Apple Podcasts: podcasts.apple.com/hr/podcast/s...

February 2026 Newsletter - Society of Research Software Engineering Headlines Welcome to this month’s Newsletter. This month we have some new and ongoing career‑building opportunities (the N8CIR summer internships and SocRSE’s mentoring scheme), emerging research…

The February Newsletter is out! This month we have some new and ongoing career‑building opportunities, emerging research directions, and upcoming gatherings that connect our community. Dive in for the latest ways collaborate and shape the future of research software.

society-rse.org/february-202...

𝗙𝗿𝗼𝗺 𝗖𝗵𝗮𝗺𝗼𝗻𝗶𝘅 𝘁𝗼 𝗝𝗮𝗽𝗮𝗻: strengthening #EUJapan collaboration in climate science 🌏
Joachim Biercamp shares his reflections on how the #HANAMI High-Level Symposium helped researchers explore advances in climate modelling, #HPC and #AI.

🔗 shorturl.at/JXcU9

#climatechange #climatemodelling

New #HPC Job! 🕶️
Computational Specialist
Location: Evanston, IL
Employer: Northwestern University
Remote: Hybrid

🙌 Our FEM@LLNL seminar series just hit 50 talks.

🙏 Huge thanks to all our speakers and attendees for making the series a success!

👉 If you are interested in finite elements, PDEs, solvers, or HPC, check out the talk recordings:

www.youtube.com/playlist?lis...

#FEM #HPC #OpenSource

#AMD released the "CPU Timing and Power Side Channel Guidance" pdf 71030 v1.1:
docs.amd.com/v/u/en-US/71...

For Women’s History Month 2026, ACM is teaming up with ACM-W to celebrate the incredible contributions and achievements of women in tech.

Throughout March, we’ll be spotlighting ACM-W-led conferences, events, and the latest episode of Voices of ACM-W. Stay Tuned! 💻

📣 Students: applications are OPEN for the #ACM #PEARC26 Student Program!

🎓 Gain skills, meet mentors, visit HPC centers, attend job fair, lightning talks & more

👉 Learn more: mailchi.mp/pearc/pearc-...

#StudentOpportunity #ResearchComputing #RCD #PEARC #ResearchData #HPC

HPC Carpentry Approved as The Carpentries' Fourth Lesson Program On 5 February 2026, our Board of Directors voted unanimously to approve the adoption of HPC Carpentry as the fourth official lesson program of The Carpentries, alongside the Data Carpentry, Library Ca...

From The Carpentries @carpentries.carpentries.org | HPC Carpentry Approved as The Carpentries' Fourth Lesson Program | #HPC #OpenScience #Education 🖥️ 🧪 🔓
⬇️
carpentries.org/blog/2026/02...

From Introducing Project Batch Jobs in Release 25.10 that helps you avoid friction and dependency drift. Learn how JuliaHub grabs your entire environment when you submit your project batch job.

Scaling from local dev to cluster shouldn’t break your workflow. Project Batch Jobs in JuliaHub 25.10 replicate your full Project environment on cluster nodes—dependencies and specs included. Launch in a click and keep outputs organized. juliahub.com/blog/project...
#JuliaLang #JuliaHub #HPC

The PARAM Pravega supercomputer at the Indian Institute of Science, Bangalore (image by Andra Sonia Petrutiu). Glass enclosed raised floor computer room with double glass door entrance.

New Interfaces article!! (link below) Insightful article on the history of Indian supercomputing by Cornell U. STS scholar Andra Sonia Petrutiu "Disrupting Flattening Universal Ambitions: The Case of Supercomputing in India." #histsci #supercomputing #india #history

cse.umn.edu/cbi/interfaces

✈️ Attending #ACM #PEARC26? Book using the group rates! ✈️

🎉 Choose from three major hotel chains near the Minneapolis Convention Center: pick the one that fits you best!

🔗 Details: pearc.acm.org/pearc26/hote...

#ResearchComputing #RCD #PEARC #ResearchData #HPC

Morning! Meet some members of the Rocky Linux community that were at SC25 and find some areas to lend a hand within the project.

#SC25 #rockylinux #resf

Last reminder 🚨 . Only two days left to nominate your favorite young researcher in #HPC for the Jack Dongarra early career award!

One of the highest awards for young researchers in the field on honor of our dear friend Jack 🎓️.

buff.ly/zJHvUUO

🔎 Explore ESPResSo pre-releases via dev.eessi.io

Several commits of the python branch of ESPResSo can now be used on #HPC clusters that adopted EESSI, as well as in GitHub CI/CD.

➡️ www.multixscale.eu/2026/02/24/e...

@eessi.bsky.social

HPC++: An LLVM-Based Automatic Parallelization Framework with Heterogeneous CPU–GPU Execution We present HPC++, an automatic parallelization framework that transforms sequential C++ programs into efficient parallel implementations targeting both multi-core CPUs and OpenCL-capable GPUs. Oper…

HPC++: An LLVM-Based Automatic Parallelization Framework with Heterogeneous CPU–GPU Execution

#OpenCL #HPC #LLVM

hgpu.org?p=30590

#AMD has re-released PDFs 69191 and 69192, removing the "AMD Confidential" headers.
#AVX512_BMM specification:
docs.amd.com/v/u/en-US/69...
#FRED specification:
docs.amd.com/v/u/en-US/69...