Kelsey Florek's Avatar

Kelsey Florek

@k-florek.net

Infectious Disease Genomics and Data Scientist @ Wisconsin State Laboratory #publichealth, #genomics, #infectiousdiseases, #openscience, #opendata Personal account, art and opinions are my own.

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21.11.2024
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Latest posts by Kelsey Florek @k-florek.net

A slightly abstract painting of a pair of women wearing blue lab coats working in the laboratory with the the shape of a DNA helix between them.

A slightly abstract painting of a pair of women wearing blue lab coats working in the laboratory with the the shape of a DNA helix between them.

A painting I made as appreciation for all the work our public health labs do! With a subtle nod to genomics as a part of that ☺️

#publichealth #art #watercolor

17.09.2025 22:16 👍 8 🔁 0 💬 1 📌 0
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New COVID vaccine policy limits choice, could raise risk for younger groups | Harvard T.H. Chan School of Public Health Bill Hanage discusses the implications of a new FDA policy that will limit the COVID-19 vaccine to people over age 65 and those with certain medical conditions.

It is certainly reasonable to question exactly how helpful covid boosters are for younger people, but the new FDA policy goes beyond that...

hsph.harvard.edu/news/new-cov...

22.05.2025 20:32 👍 23 🔁 7 💬 2 📌 0
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Advantages of Software Containerization in Public Health Infectious Disease Genomic Surveillance Software Containerization in Disease Surveillance

I am very excited to share that we have a publication describing the State Public Health Bioinformatics (StaPH-B) Docker container project!! 🧬🖥️ Amazing work by the community and a special thanks to the co-authors who keep this project going!!

#Bioinformatics #StaPH-B

wwwnc.cdc.gov/eid/article/...

12.05.2025 17:40 👍 5 🔁 0 💬 0 📌 0
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Leveraging generative AI to accelerate public health genomics data standardization | Amazon Web Services In this post, we discuss the AI Genomic Schema Harmonizer, a generative AI–powered application that revolutionizes how laboratories prepare genomic data for submission to public repositories.

Just finished a proof-of-concept using an LLM (Anthropic Claude) to connect genomic metadata fields from an internal LIMS system to NCBI's BioSample and SRA submission templates.

A fantastic collaboration between Cal Poly, AWS, DCLS, and WSLH!
aws.amazon.com/blogs/public...
#bioinformatics

05.05.2025 21:23 👍 4 🔁 0 💬 0 📌 0
Watercolor painting of an owl with a variety of red and brown tones in a loose style

Watercolor painting of an owl with a variety of red and brown tones in a loose style

Saturday Morning Owl Painting

#art #watercolor #owl

03.05.2025 23:11 👍 9 🔁 0 💬 0 📌 0
A watercolor portrait of an older man with grey hair and beard feeding a seagull

A watercolor portrait of an older man with grey hair and beard feeding a seagull

It's been a bit since I've had the emotional bandwidth to be creative but it felt good to paint this

#art #watercolor

16.04.2025 03:27 👍 13 🔁 0 💬 0 📌 0

Did all the disks fail at the same time? I've heard of that happening...

28.03.2025 22:26 👍 1 🔁 0 💬 1 📌 0
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RFK Jr. claws back $11.4B in CDC funding amid wave of top-level departures The funding went to state health departments for COVID-19 responses.

arstechnica.com/health/2025/...

26.03.2025 00:24 👍 6 🔁 4 💬 1 📌 0
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"Build a Bioinformatician"

24.03.2025 22:19 👍 2 🔁 0 💬 0 📌 0
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The Rocinante
"A legitimate salvage"

24.03.2025 22:06 👍 0 🔁 0 💬 0 📌 0

This has been a fantastic workshop. Great takes and participation from everyone!

24.03.2025 21:01 👍 1 🔁 0 💬 0 📌 0
NBC News

Trump targets Education Department and Steve Kornacki's NCAA picks: Morning Rundown

President Donald Trump is expected to sign an executive order to close the Education Department, which he has long pledged to dismantle.

NBC News Trump targets Education Department and Steve Kornacki's NCAA picks: Morning Rundown President Donald Trump is expected to sign an executive order to close the Education Department, which he has long pledged to dismantle.

It's rubbish how the dismantling of our education system is treated like an everyday bullet point 🤬🤬🤬

20.03.2025 17:49 👍 1 🔁 0 💬 0 📌 0
Dr. Torsten Seemann and Dr. Kelsey Florek standing in front of a seated audience next to a presentation slide displaying the title "Building Resilient Public Health Genomic Systems with Data Lakes and Automation".

Dr. Torsten Seemann and Dr. Kelsey Florek standing in front of a seated audience next to a presentation slide displaying the title "Building Resilient Public Health Genomic Systems with Data Lakes and Automation".

Big thanks to @torstenseemann.bsky.social for hosting me at the Centre for Pathogen Genomics. It was lovely to meet everyone and see the awesome binfo work happening in Asia-Pacific!

#Austrakka #Bioinformatics #PublicHealth

28.02.2025 02:58 👍 14 🔁 1 💬 0 📌 0

🎤 Ask us anything! 🙋‍♂️🙋‍♀️🙋
In honor of reaching 100K (❣️) followers, we are holding an AMA right now!
This is an #AltGov tradition and since we stand on the shoulders of our AltGov fam, we have gathered our team and are happy to take questions in the responses.
⚠️ We do not give medical or legal advice.

28.02.2025 01:59 👍 1155 🔁 106 💬 124 📌 6
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CDC cuts expected to devastate Epidemic Intelligence Service, a ‘crown jewel’ of public health Members of the CDC's Epidemic Intelligence Service were warned Friday that many of them were about to be fired

Make no mistake. This is an all-out attack on health in America.

Not only is the EIS vital to controlling infectious disease; it was where a remarkably high fraction of our public health leaders received formative training and experience.

www.statnews.com/2025/02/14/t...

14.02.2025 23:30 👍 1827 🔁 672 💬 41 📌 31

Book burning is book burning whether it's digital or physical

04.02.2025 14:11 👍 5 🔁 0 💬 0 📌 0

ASM is an embarrassment - plain and simple. Just disgraceful.

@vscooper.micropopbio.org, will we see more courageous leadership this summer? If there's anything left by then, it's going to be necessary, I'm sad to say.

03.02.2025 21:45 👍 36 🔁 9 💬 3 📌 1
A crow standing on a stump with cat kibble looking at the camera.

A crow standing on a stump with cat kibble looking at the camera.

Crow friends are the best!

03.02.2025 20:54 👍 3 🔁 0 💬 0 📌 0

"Shock and awe" was the strategy from the start. Its goal, create confusion and paralysis. Pick issues and fight them, coordinate and resist. Write senators and representatives and donate to organizations taking action if you can.

31.01.2025 03:32 👍 1 🔁 1 💬 0 📌 0
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CDC ordered to stop working with WHO immediately, upending expectations of an extended withdrawal U.S. public health officials have been told to stop working with the World Health Organization, effective immediately. The surprise decision is focused on the U.S.

Withdrawing US funding from the World Health Organization is a potential disaster for public health worldwide, due to the impact it will have on the important work the WHO does. Preventing the CDC from even *talking* with WHO personnel is a step much farther toward undermining global health & safety

27.01.2025 22:31 👍 4690 🔁 1534 💬 324 📌 175

Thanks 😊
I'm hanging in there, I hope you are doing ok!

23.01.2025 23:58 👍 1 🔁 0 💬 0 📌 0
A watercolor painting of a blue swallow perched on a sunflower with another in the background.

A watercolor painting of a blue swallow perched on a sunflower with another in the background.

Amongst sailors, the swallow represents a hope of returning home. Perched on a sunflower of warmth and joy it is a symbol of hope. That we can return from the insanity that has begun.

#watercolor #swallow #art #painting

23.01.2025 03:32 👍 7 🔁 0 💬 1 📌 0
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It's Friday afternoon, it's 18 F outside, I'm in the basement with a space heater, it's dark, and I don't have any more meetings today...

It's time to code!

17.01.2025 21:16 👍 1 🔁 0 💬 0 📌 0

As one of the faculty helping with this program I am really excited for the content that is being put together for this program!

I wish something like this existed when I was starting in public health

17.01.2025 21:08 👍 0 🔁 0 💬 0 📌 0

bsky.app/profile/carl...

17.01.2025 05:26 👍 1 🔁 0 💬 0 📌 0
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My first Bluesky painting post and also my first duck! Here is a Barrow's goldeneyes watercolor from a reference photo taken by @carlbergstrom.com

17.01.2025 05:25 👍 12 🔁 1 💬 2 📌 0

Strategic investment in innovative laboratory and informatic technologies is critical for both public health and national security. Read more about our work to build resilient, adaptable, and pathogen agnostic infectious disease surveillance across the US public health system www.cdc.gov/amd

13.01.2025 00:59 👍 34 🔁 16 💬 1 📌 1

I saw this and thought the same thing! Your photos are gorgeous and with your permission I'd love to use them for a watercolor paintings! I will of course credit you for the original photo.

13.01.2025 15:44 👍 1 🔁 0 💬 1 📌 0

I figured that might be the case but thought I'd mention it anyways

10.01.2025 19:47 👍 1 🔁 0 💬 0 📌 0

We had some luck with the illumina respiratory pathogen id/amr panel (RPIP).

10.01.2025 17:46 👍 1 🔁 0 💬 1 📌 0