A really nice Anotylus rugosus from my dry pitfall traps
Final day of Integrative Biodiversity Discovery at @nhm-london.bsky.social. We are comparing automatic model selection and GTR+G for maximum likelihood tree inference, for resolving phylogenetic relationships in our millipedes #DNA
Practiced building a #bioinformatics pipeline in a Conda environment to process millipede sequencing data: trimmed adapters in Porechop, performed QC with NanoPlot, filtered reads using Nanofilt, assembled genomes with Flye, and assessed completeness with BUSCO @nhm-london.bsky.social #DNA
Met the Element Biosciences AVITI #DNA sequencer at @nhm-london.bsky.social, here showing a poor read from a historic insect sample and a great read from modern snail DNA
So many great invert photos at Wildlife Photographer of the Year @nhm-london.bsky.social
The first day in the lab at @nhm-london.bsky.social Integrative Biodiversity Discovery course. We collected millipedes, separated voucher samples, and carried out DNA quality control with Qubit and Nanodrop
Adult male smooth newt at @nhm-london.bsky.social Urban Nature Garden
Great first day behind the scenes at the @nhm-london.bsky.social, looking at the dry and wet collections
Extremely excited to be at @nhm-london.bsky.social this week for a course on Integrated Biodiversity Discovery
A Tachus species, a springtail hunter
Tachyporus dispar, with 4 hairs on the edge of each elytra
I got one to species! Rugilis rufipes, with a skinny neck and funny little eyes. I love those diesel elytra
Superfamily Aleocharinae, chunky with a mohair waistcoat, adorable
Already amazed by the diverse morphology of these little rove beetles. This one is superfamily Tachyporinae, tribe Tachyporini
First try at staphylinid ID, for dietary metabarcoding. I'm not going to try to get them all to species, or even genus! This one is superfamily Staphylininae, I think
Happy to be back in the lab with my spiders. This is a male Neriene clathrata, I think
Last day of the @nerc-eof.bsky.social course on #Python for #Bioinformatics today, learning how to process #eDNA and other #sequencing data in FASTQ format from #NGS platforms like Illumina, using biopython tools from the module seqIO 🥼🧪🧬💻 #Genomics
Excited to be learning #Python for #Bioinformatics with @nerc-eof.bsky.social today, building my skills for ecological networks analysis once I have all my #metabarcoding data
Thank you this is extremely helpful!
Exciting talk by @maximuminsect.bsky.social today on driver ants, and such an interesting finding that an extra caste in one species may result in niche differentiation to explain two otherwise similar species occupying the same habitat
Drassodes with the trochanter notches and tubular spinnerets, most likely cupreus, I couldn't get a good view on a chelicera to confirm @britishspiders.bsky.social #Arachnids #Spiders
Thanks for the tip
Xysticus juvenile, likely a ground dwelling species @britishspiders.bsky.social #Arachnids #Spiders
Pardosa amenata, however this is a juvenile so I'm less confident
Alopecosa juvenile, I think
Pardosa nigriceps, adult female
My first go at spider ID! Pardosa pullata
Gorgeous metalic blue on this Leistus spinibarbis 💙
A very nice Leistus spinibarbis, I couldn't capture the electric blue sheen