Wir arbeiten bei @galaxyfreiburg viel mit #markdown tutorials auf Englisch. Viele der Infos, die da rein sollen, bekomme ich auf Deutsch, letzte Woche als Bild. Also hab ich einen kleinen #workflow gebastelt, der mir das Bild maschinenlesbar ins Markdown umwandelt und dann ins Englische […]

Ten common misconceptions about Galaxy (and why they are wrong!) Author summary Galaxy is a free, community-built web interface that helps scientists analyse data in a way that’s easy to use, transparent and reproducible. While it is widely used in biology and othe...

From @bebatut.bsky.social @abretaud.bsky.social @hrhotz.bsky.social et al. in @plos.org #Computational #Biology | Ten common misconceptions about Galaxy (and why they are wrong!) | #Bioinformatics #Education #UseGalaxy 🧬 🖥️ 🧪 🔓 CC/ @galaxyproject.bsky.social
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journals.plos.org/ploscompbiol...

We all have preconceptions - but are all of them true?

My colleagues within @galaxyproject collected several misconceptions on Galaxy and explained why they are wrong!

Thanks for the fascinating read🤓

journals.plos.org/ploscompbiol/article

#usegalaxy […]

Of course, if you have organisms/assemblies you'd like to see added, or have suggestions about funtionality, let us know!

@galaxyproject.bsky.social
#UseGalaxy (3/3)

cdf.uni-freiburg.de/en/events/2026-02-09-lov...

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway (2/2)

🔬 Excited to announce the Galaxy #Metagenome Training Course 2026!
💻 Online | 📅 March 5–6, 2025 | ⏰ 10:00–14:00 CET
✨ Covers Galaxy, amplicon & metagenome workflows, assembly, binning, functional annotation & more.
🚀 Beginner-friendly, no participation fee!
🔗 www.denbi.de/training-cou...
#UseGalaxy

Screenshot showing the credentials interface in a tool form

Galaxy 25.1 introduces a powerful new credentials system that lets tools securely access external APIs and services with encrypted secret storage and a streamlined user experience.
galaxyproject.org/news/2026-01-12-tool-cre...

#UseGalaxy #GalaxyProject #EOSC

www.denbi.de/de-nbi-events/2006-the-d...

@denbi.bsky.social
#UseGalaxy #GalaxyProject #NFDI #Bioinformatics (2/2)

GPU-accelerated genome mapper Parabricks FQ2BAM is now in Galaxy NVIDIA Parabricks GPU-accelerated FQ2BAM is now available in Galaxy, bringing FASTQ-to-BAM alignment runtime to just a few minutes for 2.5 GB paired-end human whole-genome datasets. Its runtime is ben

remain essentially identical to CPU-based alignment—while delivering a major speedup for Galaxy workflows.
https://galaxyproject.org/news/2025-12-15-fq2bam/

#UseGalaxy #GalaxyProject #EOSC (2/2)

nfdi4plants.org/news/2025-11-28-dataplan...

#UseGalaxy #GalaxyProject #EOSC #NFDI #DataPlant #Workshop #architecture #DataHub #SoftwareAsAService #ro-crates #rocractes #arc #interoperable (3/3)

Jetzt noch schnell anmelden für die Einführung in die Analyseplattform #usegalaxy für reproduzierbare #Wissenschaft #Opensource und im Browser.

Das Fokusmodul der Hefdi Dataschool am Mittwoch, 03.12. 10:00-11:30.

https://dataschool.hefdi.de/module/galaxy-europe/

Ich freue mich auf euch! […]

Ich freue mich auf die #TKFDMCoffeeLecture mit @tkfdm

Um 14 Uhr geht es los. Nochmal schnell das Heißgetränk eurer Wahl vorbereiten, anmelden und dann um 14 Uhr hören, wie #usegalaxy euch beim Analysieren eurer Texte, Daten und Medien in einer #opensource Umgebung mit #FDM helfen kann […]

Galaxy Tool Wrapping: Introducing the New Tool Developers SIG Join the newly formed Tool Developers Special Interest Group (SIG) to collaborate on high-quality tool maintenance and standardize best practices across the Galaxy ecosystem. This initiative offers a

of all experience levels.
https://galaxyproject.org/news/2025-11-20-tools-sig/

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway #Community #Tool #Development (2/2)

#Bioinformatics #DataScience #OpenScience #Research #Workflows #Usegalaxy #GalaxyProject (2/2)

Register for our introductory online workshop at the HeFDI Data School to find out more!
Please note, that this course will be in German!

📍 Online
📅 3 December 2025
🔗 More info & registration: https://dataschool.hefdi.de/module/galaxy-europe/

#UseGalaxy #GalaxyProject #EOSC (2/3)

Poland: eosc.pl/search/all_collection

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway #OpenSience #EOSCSymposium2025 (2/2)

galaxyproject.org/news/2025-11-21-eosc-sym...

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway #NFDI #BERD (2/2)

Quality control 1

Quality control 2

Bellavista IT

Reprocess and refine the single-cell results of MERSCOPE experiments
https://galaxyproject.org/news/2025-05-19-vpt/

#UseGalaxy #GalaxyProject #EOSC #Spatial_transcriptomics #MERSCOPE

training.galaxyproject.org/training-material/events...

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway (3/3)

a quick overview of how you can use the open source platform Galaxy for your research.

📍 Online
📅 26 November 2025
🔗 More info & registration: forschungsdaten-thueringen.de/veranstaltung/Galaxy.htm...

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway (2/2)

Of course, if you have organisms/assemblies you'd like to see added, or have suggestions about funtionality, let us know!

@galaxyproject.bsky.social
#UseGalaxy (3/3)

One framework, one workflow, many communities: Freiburg Galaxy team at Galaxy showed how 'one framework, one workflow, many communities' can run cross-disciplinary imaging analyses on the emerging EOSC Federation. Here is what we presented, with slides and video.

Galaxy showed how 'one framework, one workflow, many communities' can run cross-disciplinary imaging analyses on the emerging EOSC Federation. Here is what we presented, with slides and video.
galaxyproject.org/news/2025-11-13-eosc-sym...

#UseGalaxy #GalaxyProject #EOSC (1/2)

galaxyproject.org/news/2025-11-18-eosc-sym...

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway (2/2)

From Functional Nucleic Acids to Galaxy Training: Reflections on My Re Collaboration and innovation with the Galaxy Europe team

Collaboration and innovation with the Galaxy Europe team
galaxyproject.org/news/2025-10-20-galaxy-g...

#UseGalaxy #GalaxyProject #EOSC

galaxyproject.org/news/2025-11-06-egd2025-...

#UseGalaxy #GalaxyProject #EOSC #EuroScienceGateway #EGD2025 #Talks #ScientificTalk #Presentation #Event (2/2)

🚀 de.NBI & ELIXIR-DE on tour at EOSC Symposium 2025 in Brussels!
Björn Grüning showcased the power of @galaxyproject.bsky.social Europe (usegalaxy.eu) and the de.NBI Cloud in the EOSC ecosystem.
#EOSC2025 #Bioinformatics #usegalaxy #ELIXIRDE #deNBI

Our project "Evolving FAIR Image Analysis in Galaxy for Cross-domain and AI-ready Applications" has been accepted at the #biohackeu25. Join us from tomorrow on in Berlin! #usegalaxy

From @mdpiopenaccess.bsky.social #Viruses | vvv2_align_[SE|PE|display]: Galaxy-Based Workflows & Tool Designed 2 Perform, Summarize & Visualize Variant Calling & Annotation in #Viral #Genome Assemblies | #UseGalaxy #Bioinformatics #OpenScience #NGS 🧬 🖥️ 🧪 🔓 🇫🇷
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www.mdpi.com/1999-4915/17...

RSpace joins the Galaxy

RSpace joins the Galaxy
galaxyproject.org/news/2025-06-23-rspace-i...

@researchspace.com
#UseGalaxy #GalaxyProject #EOSC #ELN #RDM #RSpace

🌌🧬 The legendary hands-on @galaxyproject.bsky.social workshop is back—don’t miss out!
📅 March 9–13, 2026 | 📍 Uni Freiburg
Beginners welcome—learn QC, #ChIP-seq, #RNA-seq, variant calling & #microbiome analysis in Galaxy!
🔗 More info: training.galaxyproject.org/training-mat...
#useGalaxy #NGS