Weekly reads 5/1/26 Standardizing, disentangling, and interpreting cells in space

Weekly reads 5/1/26:
Standardizing, disentangling, and interpreting cells in space

open.substack.com/pub/behindth...

#SingleCel #Epigenomics #SpatialBiology #CRISPR #CellCellCommunication #AIinBiology #SpatialOmics

Cell–cell communication shapes development, immunity, and disease. A broad synthesis of signaling modes and clinical implications.
#CellCellCommunication #Immunology #SignalTransduction #DevelopmentalBiology
www.nature.com/articles/s41...

The #AMICI 🤝 tutorial is out! Bringing #attention to #cellcellcommunication 🚨👉 amici-st.readthedocs.io/en/latest/
#spatialtranscriptomics #compbio #machinelearning

#PhDstudent position in our lab – come join us to study epithelial:non-epithelial cell-cell interactions in mammalian tissues. We provide thorough training & an awesome team!
Apply by Sept. 16: shorturl.at/o9vzd
#epithelia #cellbiology #nextgenerationPhD #cellcellcommunication @hetcci.bsky.social

#Job alert: #Postdoc position in the Iden lab within the new #DFG #SPP2493 consortium #HetCCI @hetcci.bsky.social ci.bsky.social‬. Please share, or apply if you want to dissect epithelial:non-epithelial cell-cell interactions: https://shorturl.at/W3M5z #CellCellCommunication #epithelia #cellbiology

Advancing cell–cell communication analysis from single-cell genomics data - Nature Protocols CellPhoneDB infers cell–cell communication by integrating single-cell genomics data with a curated database of ligand–receptor interactions. Now, a Protocol Update describes the latest version of the ...

News & Views discussing the latest implementation of the computational tool #CellPhoneDB for inferring #cellcellcommunication from #singlecelldata bit.ly/42gSmXi

Unraveling cell–cell communication with NicheNet by inferring active ligands from transcriptomics data - Nature Protocols NicheNet is a computational tool to infer the ligand–receptor interactions that potentially regulate gene expression changes in receiver cell populations, by producing a list of prioritized ligands an...

#NewNProt for unraveling #cellcellcommunication with #NicheNet by inferring active ligands from #transcriptomics data bit.ly/41FP0xK