New Epigenome Technologies Blog post!

"Fine-turning Borzoi with Single-Cell Epigenetics"

Start reading on our blog bit.ly/4cS72CS and read all the details on our new Substack page bit.ly/40sDTXD

#EpigenomeTech #Blog #Epigenetics #SingleCells #FoundationModels

SciLifeLab Voices: Caroline Gallant and Isolde Palombo of Alpha Cell Alpha Cell is a new strategic research program at SciLifeLab. This time in our SciLifeLab Voices series, we spoke with Caroline Gallant, Scientific Program Manager for Alpha Cell, and Isolde Palombo, ...

Alpha Cell is a new strategic research program at SciLifeLab dedicated to uncovering the molecular structure and function of #SingleCells in time and space 🧪

We spoke with Caroline Gallant, Scientific Program Manager for Alpha Cell, and Isolde Palombo, Project Coordinator of the program. ↓

TE-SCALE: a comprehensive database for exploring transposable element expression across human cancers at single-cell resolution Abstract. Transposable elements (TEs) are repetitive DNA sequences typically silenced in normal tissues. Their dysregulation in cancer can significantly im

TE-SCALE: a comprehensive database for exploring transposable element expression across human cancers at single-cell resolution. #TransposableElements #TE #HumanCancer #SingleCells #NAR @narjournal.bsky.social 🧪🧬 🖥️
academic.oup.com/nar/advance-...

High-resolution detection of copy number alterations in single cells with HiScanner. #CNV #CopyNumberAlterations #SingleCells #Genomics #Bioinformatics @natcomms.nature.com 🧬 🖥️
www.nature.com/articles/s41...

Morphodynamics of human early brain organoid development - Nature Human brain morphodynamics are explored using organoids.

Opus magnum of my former #PhD student @akanksha-jain.bsky.social. She brought the power of #lightsheet imaging to the #Treutlein lab. #Organoids #singlecells #bigdata #imageanalysis You have learned much #Akanksha. You are a #JEDI now. ❤️👏

www.nature.com/articles/s41...

Intracellular #bacteria could play a role in the pathology and progression of various #diseases. Our new FocuSCOPE 16s kit detects host cell transcriptome AND intercellular bacteria #16S from same #singlecells. Contact us at info@singleron.bio to find out more!

🚀 Ready for discussion of “Balancing Rigor, Interpretability & Innovation: Desiderata for Biological Representation Learning" with:
🔹 Jean-Philippe Vert #drugdiscovery
🔹 Catherine Tong #proteinstructure
🔹 Daniel Burkhardt #multiscalebiology
🔹 Tim Stuart #singlecells
🔹 Mor Nitzan #cellmodelling
❓

Mapping cell diversity with long-read sequencing and single-cell genomics Our researchers are combining single cell approaches with long read sequencing technologies, unearthing data that reveals the scale and impact of cellular diversity.

💬 “We’ve been trying to take this kind of approach for nearly 10 years now, having first applied #longread #sequencing to #singlecells during the development of the G&T-seq protocol." - Dr Iain Macaulay

➡️ https://buff.ly/42Cc95d

🧪

We are #hiring. A permanent position of junior research scientist for studying Cellular Heterogeneity and Fungal Metabolism.

Info and application online : urls.fr/eEDZIK
See also : urls.fr/_IGrSG

Dead line for application March 4, 2025

#fusarium, #mycotoxins, #singleCells

Very excited to share our work with the QMUL Epigenetics hub and everyone else that is interested to join online and learn what the lab has been up to with regard to #transposons #longreads #nanopore and #singlecells

FocuSCOPE® - Targeted Variant Detection - Singleron The FocuSCOPE Single Cell Targeted Capture Kit utilizes targeted customized probes for simultaneous whole transcriptome sequencing.

#EBV plays important roles in diseases like B cell lymphomas, T/NK cell lymphoproliferative diseases, and nasopharyngeal #cancer. Our FocuSCOPE (singleron.bio/products/foc...) detects EBV virus and host transcriptome in same #singlecells to shed more lights on its pathogenesis and treatment.

This week's @10xgenomics.bsky.social #Xenium run out of the #DukeMGC on #colon & #lung tissue.

#SingleCells, single cells, single all the way! 🧬📷

#SpatialTranscriptomics #InSituSequencing #10xGenomics #scRNAseq #CoreFacility

For my first post to BlueSky I'm going back to my archive to post a little something I created 5 years ago. Happy little tSNEs. #singlecells #genomics

Hello friends and colleagues, I just landed here. I hope to connect with all of you soon to establish a constructive network of exchange. Some tags to be easier find: #singlecells #RNAVelocity #omics #development #stemcells #brain #neurobiology #bioinformatics #datascience #lipidomics #RNA

Microrobotics and Single Cell Micromanipulation for Medicine This joint mini-symposium between University of Toronto and WEISS at UCL discusses microrobotics and cell micromanipulation for medicine

If interested in #microrobotics and #singlecells, check out the virtual "Microrobotics and Single Cell Micromanipulation for Medicine" symposium next Thursday, sponsored by @global_uoft and @UCL_Global! https://t.co/bnPnG0rz1n

@dianadries Ok! Ik ga kijken! #clockgene #fluctuate #singlecells"