Modulation of the leaf transcriptome of Quercus robur by specialist and generalist herbivorous insects Abstract. Plants deploy complex transcriptional responses to herbivores, yet, differences in the responses to generalist versus specialist insects, especia

#Plant-Herbivore-Interactions
#Oak tree #transcriptomes respond differently to attacks by generalistic or specialistic herbivores. A new paper from our long-term partnership with #BirgitKersten, #HilkeSchroder & #MalteMadee from @thuenen.de Institute #ForestGenetics, @andreaghirardo.bsky.social

From our Cytosurge × #Lexogen webinar. Why snapshots fall short: #Liveseq builds a linked timeline for the same cell, revealing how #transcriptomes change over time. Watch the snippet (Dr. Rizzo). Recording + slides 👉 QR code at the end of the video

#FluidFM #SingleCell #SameCell #NGS #RNAseq

Taming the reference genome jungle: the refget sequence collection standard. #ReferenceGenomes #Transcriptomes #SequenceCollectionStandards #GA4GH @biorxiv-genomic.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...

Amazing first #proceeding talk at @hitseq.bsky.social by Lauren Martens! In her work, she benchmarks different tools to perform deconvolution on spatial data using single cell data references to estimate cell type fractions in a tissue context using spatial transc! #transcriptomes #algorithms

Transcription gets more noisy and co-expression more heterogeneous when S. islandicus cells age (in G2)
#aging #archaea #transcriptomes #networks
Thanks to Miguel Gomez Raya Vilanova :) and all great co-authors: Annette Baudisch, Claudio Franceschi, Yuping Dai, @jerometeu.bsky.social

Linking single-cell transcriptomes with secretion using SEC-seq - Nature Protocols SEC-seq is a single-cell method linking the secretion of a target protein to the cell’s transcriptome. Nanovials isolate cells and capture their secretions, and oligonucleotide-labeled antibodies tag ...

#NewNProt: SEC-seq to link #singlecell #transcriptomes with target #proteinsecretion bit.ly/41eqaDZ

Diverse Headgear Of Hoofed Mammals Evolved From A Common Ancestor, study from Baruch College & CUNY Graduate Center, published by Communications Biology

by @GrrlScientist

#evolution #GeneExpression🧬 #transcriptomes #cervidae🦌🦬🦒 #headgear #SciComm🧪 www.forbes.com/sites/grrlsc...

#HiSciSky, this is my first post! I am a computational biologist passionate about #genomics technologies and #bioinformatics. I lead Edinburgh Genomics, a core Facility at the University of Edinburgh, and am interested in #Genomes and #Transcriptomes 🧬🧪💻🔬

#centipede #venom gland #transcriptomes show at least 5 gene families recruited from bacteria & fungi and 8 horizontal gene transfer events

Phylogenetic analyses suggest centipede venom arsenals were repeatedly stocked by horizontal gene...

Calling all de novo #transcriptomes & gene models from annotated #genomes! EnTAP offers FAST functional annotation for CDS or protein seqs (sim search,GO,KEGG,domains) w/ many useful features! New Release! https://gitlab.com/enTAP/EnTAP @EBPgenome @uconneeb @UConn_Bioinfo @ngsbioinfo

Thanks to 1KITE http://www.1kite.org/ for sharing pre-pub #transcriptomes @KarenMeusemann et al. 🧬👩‍💻
Thanks to i5K http://i5k.github.io/ for sharing pre-pub #genomes @Arthropod_i5K, @Stephen96743819 et al. 🧬👨‍💻

Patrick Tam -#JulianWellsMedal2019 - presenting spatial characterization of #mouse #developmental #transcriptomes (E5.5-E7.5). Results reflect spatial localization of transcripts as visualized by #insitu. Epigenetic modifiers are non-uniformly distributed. #LorneGenome

12 #transcriptomes 🧬 & 6 #genomes 🧬 ~ 9 Adephaga (mainly predaceous) & 9 Polyphaga (mainly phytophagous) beetles 🐞 #gene family dynamics #evolution twitter.com/rmwaterhouse/status/1033...

Urs Schmidt-Ott #transcriptomes of anterior vs. posterior embryos reveals novel genes & alt. transcripts driving axis determinants in #dipterans #EntSoc17

#BUSCOv3 on Diatom #genomes & #transcriptomes http://www.biorxiv.org/content/early/2017/08/26/181115

#BUSCO v2 released! Thanks to all β-testers who helped make v2 truly great! #quality #genes #genomes #transcriptomes http://busco.ezlab.org