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Exit Interviews in #Health Professions Education: a Scoping Review #Protocol Date Submitted: Mar 13, 2026. Open Peer Review Period: Mar 13, 2026 - May 8, 2026.

Exit Interviews in #Health Professions Education: a Scoping Review #Protocol (preprint) #openscience #PeerReviewMe #PlanP

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Protocol for validating computationally predicted splice-altering variants using full-length gene reporter assays Up to half of human disease-causing variants may disrupt RNA splicing, but their computationally predicted effects require experimental validation. Here, we present a protocol to test splice-altering variants using full-length gene reporters. We describe steps for reporter construct design, site-directed mutagenesis, delivery into cells, and isoform analysis. Full-length reporters offer key advantages over minigenes, particularly for clinically relevant genes with compact loci, by preserving nat...

Protocol for validating computationally predicted splice-altering variants using full-length gene reporter assays #protocol #starprotocols #cellpress

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re!think it: Как я уместил корпоративный бэкенд в один промпт (История сборки) Краткая история о том, как утренняя...

#llm #prompt-engineering #dual #process #theory #архитектура #ии #промпты #re-think #it #protocol

Origin | Interest | Match

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Optimized protocol for dissociation of mouse intestinal epithelium to viable single-cells The functional profiling of intestinal epithelial cells (IECs), which comprise multiple heterogeneous populations, is crucial for understanding host interactions with dietary and microbial factors. Here, we present a protocol for dissociating mouse epithelium based on TrypLE Express and Dispase II. We describe steps for tissue collection, crypt isolation, and enzyme digestion. This protocol enables the recovery of millions of viable IECs from the mouse intestine and is particularly useful for is...

Optimized protocol for dissociation of mouse intestinal epithelium to viable single-cells #protocol #starprotocols #cellpress

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Original post on onedaymd.com

Ivermectin, Fenbendazole and Mebendazole Protocol in Cancer: Peer-Reviewed Protocol in Cancer We are pleased to announce that the first-of-its-kind protocol utilizing Ivermectin, Mebendazole, and F...

#cancer #cancer #stem #cell #fenbendazole #integrative #oncology #mebendazole #protocol […]

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Original post on onedaymd.com

Ivermectin, Fenbendazole and Mebendazole Protocol in Cancer: Peer-Reviewed Protocol in Cancer We are pleased to announce that the first-of-its-kind protocol utilizing Ivermectin, Mebendazole, and F...

#cancer #cancer #stem #cell #fenbendazole #integrative #oncology #mebendazole #protocol […]

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Pick one. Routine or impulse? Which do you prefer? Tell me now. Be present. Decide with structure. #Submission #Protocol

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Protocol for recording visual maps in the mouse superior colliculus and visual cortex with intrinsic optical imaging Intrinsic optical imaging (IOI) is a powerful approach to record visual-functional maps across the mouse superior colliculus (SC) and primary visual cortex (V1). Here, we present a protocol to map retinotopy and orientation preference in the SC within 15 min using periodic stimulation and Fourier analysis. We also describe how to obtain ocular dominance maps in V1 from independent monocular stimulation. We provide detailed instructions for surgical preparation, imaging setup, and preprocessing t...

Protocol for recording visual maps in the mouse superior colliculus and visual cortex with intrinsic optical imaging #protocol #starprotocols #cellpress

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Protocol for quality control screening of brain organoid morphology Neural organoids can exhibit variability in both tissue shape and tissue identity. Here, we present a pipeline for rapid, protocol-agnostic quality control screening of brain organoids based on their overall gross morphology. We describe a semi-automated image analysis of organoid size, shape, and texture from 2D bright-field imaging. We provide a reference dataset of brain organoids with complex morphology. We show how to integrate input and reference organoids and perform the unbiased sample s...

Protocol for quality control screening of brain organoid morphology #protocol #starprotocols #cellpress

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Evaluation of the Comparative Efficacy of an Ayurvedic Formulation (Nimba-Amalakyadi Powder) vs Metformin in the Management of Type 2 #Diabetes Mellitus: #Protocol for a Pilot #Study Background: In Ayurveda, (#Diabetes mellitus) is considered (one among eight diseases difficult to treat and cure). (three bio-humor in Ayurveda) with certain metabolic factors are involved in its pathogenesis. Frequent urination is a common symptom of this disease. #Diabetes mellitus can be confused with type 2 #Diabetes mellitus in conventional science due to the resemblance in cardinal features. Objective: The primary objectives of this pilot #Study are to assess feasibility through recruitment, retention, adherence, data completeness, and participant acceptability. It also aims to estimate variability in outcome measures like fasting blood sugar and glycated hemoglobin (HbA). The secondary, exploratory objective is to observe trends in these clinical indicators to inform effect size assumptions for future trials. Methods: In this pilot #Study 36 individuals with type 2 #Diabetes mellitus will be recruited and split into two equal groups at random. In Group A (Control), metformin tablets (500 mg) will be prescribed daily once before lunch with plain water for 45 consecutive days. In Group B (Interventional group), the formulation will be prescribed 5 grams twice daily with an empty stomach (ie, 7 AM-5 PM) with lukewarm water for 45 consecutive days. Follow-up will be taken on days 45 and 90 to #Study the sustained effect of the drug. Results: The preliminary analysis of participant responses began in January 2025. Final results from this phase are expected to be available by June 2025. Recruitment rate (number recruited/month), eligibility rate (number eligible/number screened), retention rate at 45 days, compliance with intervention (percentage of prescribed doses taken), adherence to follow-up investigations, acceptability of intervention (based on participant-reported feedback), and data completeness rates are variables. Moreover, changes in the objective parameters, ie, reductions in blood sugar level (fasting and postprandial) and HbA values of patients will be also observed and recorded. Conclusions: A conclusion will be drawn according to the clinical findings obtained at baseline and follow-up visits with biochemical reports of the patients. The trial will prove the feasibility and comparative efficacy of formulation versus metformin tablets for the management of type 2 #Diabetes mellitus Trial Registration: The Clinical Trials Registry- India (CTRI) CTRI 2021/08/036034; https://tinyurl.com/2xwc84p2 International Registered Report Identifier (IRRID): PRR1-10.2196/63574

JMIR Res Protocols: Evaluation of the Comparative Efficacy of an Ayurvedic Formulation (Nimba-Amalakyadi Powder) vs Metformin in the Management of Type 2 #Diabetes Mellitus: #Protocol for a Pilot #Study

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Protocol for generation of brain metastasis mouse model using stereotactic intracranial tumor-derived cells and modified intracarotid injection Here, we present a protocol for establishing a reproducible mouse model of brain metastasis. We describe the steps for preparing and injecting tumor cells into the internal carotid artery to achieve direct cerebral circulation delivery. We detail procedures for monitoring and validating brain colonization using magnetic resonance imaging (MRI) and histological analysis (H&E staining) and provide guidance on stereotactically generating, harvesting, and re-injecting intracranial tumors via the int...

Protocol for generation of brain metastasis mouse model using stereotactic intracranial tumor-derived cells and modified intracarotid injection #protocol #starprotocols #cellpress

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Prevalence and Patterns of Ocular Surface #Disease Among Glaucoma #Patients on Topical #Medications: A Prospective Comparative Cross-Sectional #Study #Protocol Date Submitted: Mar 7, 2026. Open Peer Review Period: Mar 9, 2026 - May 4, 2026.

Reminder>> Prevalence and Patterns of Ocular Surface #Disease Among Glaucoma #Patients on Topical #Medications: A Prospective Comparative Cross-Sectional #Study #Protocol (preprint) #openscience #PeerReviewMe #PlanP

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Re-exploring adult cochlear implant assessment referrals in the United Kingdom (CIRCA-2): #Study #Protocol for a national multicentre retrospective observational #Study Date Submitted: Mar 8, 2026. Open Peer Review Period: Mar 9, 2026 - May 4, 2026.

Reminder>> Re-exploring adult cochlear implant assessment referrals in the United Kingdom (CIRCA-2): #Study #Protocol for a national multicentre retrospective observational #Study (preprint) #openscience #PeerReviewMe #PlanP

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Comparing Surgical Outcomes of Sodium Hyaluronate Versus Hypromellose as Ophthalmic Viscosurgical Devices in Topical Phacoemulsification Among Diabetic #Patients with Cataract: A Prospective Comparative Interventional Cohort #Study #Protocol Date Submitted: Mar 9, 2026. Open Peer Review Period: Mar 10, 2026 - May 5, 2026.

Reminder>> Comparing Surgical Outcomes of Sodium Hyaluronate Versus Hypromellose as Ophthalmic Viscosurgical Devices in Topical Phacoemulsification Among Diabetic #Patients with Cataract: A Prospective Comparative Interventional Cohort #Study #Protocol (preprint) #openscience #PeerReviewMe #PlanP

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Incidence and Anatomical Distribution of Primary Posterior Capsular Opacity During Cataract #Surgery in a Rural Population: Prospective Observational #Study #Protocol Date Submitted: Mar 8, 2026. Open Peer Review Period: Mar 9, 2026 - May 4, 2026.

Reminder>> Incidence and Anatomical Distribution of Primary Posterior Capsular Opacity During Cataract #Surgery in a Rural Population: Prospective Observational #Study #Protocol (preprint) #openscience #PeerReviewMe #PlanP

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Protocol to analyze steps of ribosome biogenesis in nuclear and cytosolic fractions of yeast cells Cell fractionation enables the study of compartment-specific RNA processing events in organisms with complex cell walls. Here, we present a protocol for isolating nuclear and cytosolic fractions from Saccharomyces cerevisiae. We describe spheroplast formation using zymolyase, followed by subcellular fractionation via a sucrose density gradient. Finally, we detail the extraction of high-quality RNA from these fractions. This approach overcomes cell wall barriers to allow the analysis of ribosome ...

Protocol to analyze steps of ribosome biogenesis in nuclear and cytosolic fractions of yeast cells #protocol #starprotocols #cellpress

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Methods of Analysis in Randomized Noninferiority Trials: Methodological Survey Review #Protocol Background: Noninferiority (NI) trial designs that investigate whether an experimental intervention is no worse than the standard of care have been used increasingly in recent years. The robustness of the conclusions depends in part on the analysis population set used. In NI settings, the intention-to-treat (ITT) and per-#Protocol (PP) analysis sets are most common. The ITT analysis has been considered anticonservative compared with the PP analysis. Objective: This #Study aimed to conduct a methodological review assessing the analysis population sets used in contemporary NI trials. Methods: A comprehensive electronic search strategy will be conducted to identify studies indexed in MEDLINE, Embase, Emcare, and Cochrane CENTRAL. Studies will be included if they are NI trials published in 2024. The primary outcome is the analysis population used for the primary analysis of the trial (ITT, PP, or as-treated). Secondary outcomes include the NI margin, effect estimates, point estimates, and corresponding CIs. Analyses will be performed using descriptive statistics. Results: The comprehensive search initially identified 1209 studies, of which 403 trials were eligible for data extraction. Data extraction began in January 2025 and is expected to be completed in January 2026. Conclusions: This methodological survey of NI trials will describe the analysis population used in the primary analysis and assess factors that may be associated with each analysis method. Trial Registration: PROSPERO CRD420251021089; https://www.crd.york.ac.uk/PROSPERO/view/CRD420251021089 International Registered Report Identifier (IRRID): DERR1-10.2196/76876

JMIR Res Protocols: Methods of Analysis in Randomized Noninferiority Trials: Methodological Survey Review #Protocol

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Cardiovascular Health and Financial Hardship: #Protocol for a Qualitative Citizen Science #Study Background: Cardiovascular disease (CVD) is the leading cause of death worldwide. Individuals with lower income or experiencing financial hardship face a significantly higher risk of developing CVD. However, there is a lack of in-depth insight into their experiences with CVD, and specific attention to women is essential. Objective: The In a Heartbeat #Study aims to understand the relationship between CVD and financial hardship and enable earlier recognition and prevention of CVD among both women and men. In this #Study #Protocol, we describe our citizen science #Study, in which we unravel the mechanisms and contexts through which financial problems lead to the development and late recognition of CVD. Methods: The main data for this #Study are collected by citizen scientists through qualitative lifeline interviews. All citizen scientists have experience with financial hardship, and some also have experience with CVD. We hold weekly project team meetings with citizen scientists and professional scientists in which we use methods such as photo elicitation, critical-creative hermeneutic analysis, design thinking, a dynamic learning agenda, and regular individual and group evaluations of the citizen science process. Results: The #Study was funded in October 2024 and started in January 2025. Data collection started in November 2025 and is expected to end halfway through 2026. Four qualitative lifeline interviews had been conducted as of December 6, 2025. Data analyses are planned for 2026. Manuscripts reporting findings on the central #Research question and the process evaluations will be submitted for publication in 2027. Conclusions: Toward the end of the #Study in 2027, we will develop and disseminate concrete recommendations for various stakeholders to prevent CVD and recognize CVD earlier among people with financial hardship. In all our analyses and recommendations, we will consider sex and gender differences. Our #Study could contribute to a reduction in health inequalities. International Registered Report Identifier (IRRID): DERR1-10.2196/89101

JMIR Res Protocols: Cardiovascular Health and Financial Hardship: #Protocol for a Qualitative Citizen Science #Study

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Evaluation Models for Undergraduate Nursing Clinical Skills: A Scoping Review #Protocol Background: Undergraduate nursing students are expected to perform a high-stakes clinical skills test, which ultimately determines their ability to engage in clinical practice. With intake number of students growing nationally, clinical instructors are modifying these skills tests to be shorter in duration as an attempt to meet scheduled class times, severely decreasing the assessments’ accuracy and increasing student stress. Objective: The objectives of this review are to examine best practices of evaluation structures or models for undergraduate nursing students participating in clinical skills-based assessments as part of their program curriculum to explore alternative, best-practice methods for evaluating key clinical skills. The goal is to use what is known in the literature to help inform the development of a new evidence-based clinical skills evaluation model that is adaptive to student population growth, enhances student learning and faculty teaching experiences, and ensures safe patient care. Methods: This scoping review will consider studies involving nursing students enrolled in an undergraduate nursing degree program who undergo clinical skills testing as part of their degree fulfillment. Original articles published in English from January 1, 2015, to present day will be included. This review will follow the Joanna Briggs Institute methodology for scoping reviews, as well as the Preferred Reporting Items for Systematic Reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) guidelines. The literature search will use the following databases: SCOPUS, CINAHL, Medline, PsycInfo, ProQuest Central, and ProQuest Dissertations and Theses to identify relevant sources. Moreover, nonempirical #Research, such as editorials, opinion papers, gray literature, and reviews, will be included. Data from professional nursing organizations, including the College of Nurses of Ontario (CNO), the Registered Nurses’ Association of Ontario (RNAO), and the Canadian Association of Schools of Nursing (CASN), will be considered. Two independent reviewers will conduct a screening of article titles and abstracts, followed by full-text reviews. Together, they will determine which articles will proceed to the data extraction stage. If discrepancies arise, a consensus discussion will take place between the two reviewers with assistance from a third reviewer. Results: The project was funded in June 2025 (Figure 1). The scoping review is scheduled to begin in July 2025, with the literature search and #Study selection processes planned through Fall 2025. Results are expected to be submitted for publication in Winter 2026. Conclusions: The results of this review will summarize the current breadth of knowledge on clinical skills testing and best-practice methods used for clinical skill evaluation among undergraduate nursing students. Any gaps in the literature will be identified as these can be used to guide future #Research within this area of nursing education. Trial Registration: OSF Registries osf.io/k7rv4; https://osf.io/k7rv4 International Registered Report Identifier (IRRID): PRR1-10.2196/79805

JMIR Res Protocols: Evaluation Models for Undergraduate Nursing Clinical Skills: A Scoping Review #Protocol

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The Effect of Integrated Aerobic and Cognitive Training (Activ4Brain) on Cognition and Neurophysiology in Older Adults: #Protocol for a Controlled Trial Date Submitted: Feb 3, 2026. Open Peer Review Period: Feb 3, 2026 - Mar 31, 2026.

Reminder>> The Effect of Integrated Aerobic and Cognitive Training (Activ4Brain) on Cognition and Neurophysiology in Older Adults: #Protocol for a Controlled Trial (preprint) #openscience #PeerReviewMe #PlanP

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Developing and Validating Measures of Structural Ableism to Improve Health Outcomes for the Disability Community: #Protocol for a Mixed Methods #Study Background: Structural ableism, defined as the processes, policies, and institutions that privilege able-bodied people over disabled people, is a root cause of health inequalities faced by the disability community. Unlike other forms of structural oppression, there are currently no adequate measurements for structural ableism and its impacts. Therefore, a necessary first step to addressing health inequities that impact the disability community is to create validated measures of structural ableism. Objective: This paper outlines the methods of an ongoing project that aims to develop and validate measures of structural ableism. The resulting measures will facilitate the identification of relationships between structural ableism and health outcomes at both an individual and community level. Methods: This project will take place across 3 phases. In Phase I, we will characterize the multiple factors that comprise the construct of structural ableism. We will begin by analyzing texts that discuss historical events, ideologies, and the lived experiences of disabled people to inform our understanding of contemporary dimensions of structural ableism. Simultaneously, key informant interviews with advocates and activists from the disability rights and disability justice movements will be conducted to further characterize the dimensions of structural ableism. In Phase II, the findings of Phase I will be used to inform the creation of an individual-level measure of structural ableism. Phase III will result in community-level measures of structural ableism, which will be developed using community-engagement studios with members of the disability community and publicly available datasets. This phase will build on the findings of the first 2 phases. Our methods purposefully include disabled people across all phases of this work, with a focus on maximizing the diversity of disability perspectives by including people across disability types and intersecting identities (eg, race and ethnicity, gender identity, geographic location, and other identities and demographics). Most importantly, our approach is deeply community-informed, drawing on multiple community partnerships from local and national organizations, a diverse advisory committee of disabled activists, advocates, and scholars, as well as #Researchers with expertise in developing measures of structural oppression, such as structural racism. Results: This project was funded in August of 2024. As of October 2025, our team has read more than 50 texts as part of our historical and policy analysis of the factors that characterize structural ableism. We plan to complete our characterization of structural ableism in the spring of 2026, with individual-level measures of structural ableism being developed by the Winter of 2028 and community-level measures created by the Winter of 2029. Conclusions: The measures developed by this work will lay the foundation for identifying and evaluating novel interventions aimed at dismantling structural ableism, which should be cocreated with the disability community.

JMIR Res Protocols: Developing and Validating Measures of Structural Ableism to Improve Health Outcomes for the Disability Community: #Protocol for a Mixed Methods #Study

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Protocol for stable cell line production to express muscle-type nicotinic receptor The adult muscle-type nicotinic acetylcholine receptor (AChR) is essential for neuromuscular transmission but is difficult to produce due to the requirement for coordinated subunit assembly. Here, we present a protocol for generating doxycycline-inducible stable cell lines that co-express all four subunits. We describe steps for lentivirus infection, puromycin selection, fluorescence-activated cell sorting, clonal expansion, and protein expression test. This protocol enables AChR production at q...

Protocol for stable cell line production to express muscle-type nicotinic receptor #protocol #starprotocols #cellpress

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Model Context Protocol (MCP) vs. AI Agent Skills: A Deep Dive into Structured Tools and Behavioral Guidance for LLMs In recent times, many developments in the agent ecosystem have focused on enabli...

#Agentic #AI #AI #Agents #Editors #Pick #Model #Context […]

[Original post on marktechpost.com]

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Immersive 3D Simulation vs. Physical Models in Training Novices for Laser-based Endourological Procedures - #Research #Protocol for a #RCT #ClinicalTrial Date Submitted: Mar 4, 2026. Open Peer Review Period: Mar 6, 2026 - May 1, 2026.

Reminder>> Immersive 3D Simulation vs. Physical Models in Training Novices for Laser-based Endourological Procedures - #Research #Protocol for a #RCT #ClinicalTrial (preprint) #openscience #PeerReviewMe #PlanP

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"Strengths, Limitations, and Distinct Characteristics of VR and Actor-Based Simulation in ##MedicalEducation #mededu: #Protocol for a Scoping Review" Date Submitted: Mar 4, 2026. Open Peer Review Period: Mar 6, 2026 - May 1, 2026.

Reminder>> "Strengths, Limitations, and Distinct Characteristics of VR and Actor-Based Simulation in ##MedicalEducation #mededu: #Protocol for a Scoping Review" (preprint) #openscience #PeerReviewMe #PlanP

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Protocol for immunofluorescence detection and quantitative analysis of pH-dependent transcriptional condensates Acidic pH regulates the assembly of transcriptional condensates containing BRD4 and MED1 in a variety of mouse and human cells. Here, we present a protocol to image and quantify BRD4 condensates in bone marrow-derived macrophages. We describe steps for preparing macrophage growth medium at controlled pH levels, performing immunofluorescence experiments, and acquiring images with Airyscan confocal and STED super-resolution microscopy. We detail image processing pipelines to analyze condensate pro...

Protocol for immunofluorescence detection and quantitative analysis of pH-dependent transcriptional condensates #protocol #starprotocols #cellpress

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Protocol for the quantification of digestive exophagy in cell culture Microglia use digestive exophagy to partially degrade, extracellularly, Alzheimer’s amyloid-beta aggregates that are too large to be phagocytosed. Here, we present a protocol to quantify this mechanism in cell culture. We describe steps for extracting primary microglial cells and preparing amyloid-beta model aggregates. We then detail procedures for measuring lysosomal exocytosis toward, and extracellular degradation of, these deposits using quantitative fluorescence microscopy. We also provide ...

Protocol for the quantification of digestive exophagy in cell culture #protocol #starprotocols #cellpress

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Protocol for large-scale, high-yield, high-purity extracellular vesicle purification from human plasma Extracellular vesicles (EVs) hold promise as biomarkers and drug delivery vehicles; however, their broader use is limited by the lack of effective and scalable purification methods. We present a protocol for purifying EVs from human plasma without ultracentrifugation. The workflow incorporates tangential flow filtration (TFF) for volume reduction, polyethylene glycol (PEG)-based precipitation for enrichment, nuclease treatment to remove extravesicular nucleic acids, and multimodal and affinity c...

Protocol for large-scale, high-yield, high-purity extracellular vesicle purification from human plasma #protocol #starprotocols #cellpress

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