CellMap Project Team

“To leave the world a bit better, whether by a healthy child, a garden patch or a redeemed social condition, to know even one life has breathed easier because you have lived; this is to have succeeded.” - Ralph Waldo Emerson

Machine Learning Researcher 🖥🔬🧫 🦆 @ Funke Lab, #HHMIJanelia Views my own.

CATMAID, Science, Research Software, OpenSource, GIS, Forestry, timberNet, kazmos GmbH

Genome Organization & Imaging Researcher | Postdoctoral Fellow at Harvard Medical School | Expert in Advanced Imaging, Image Analysis & Chromatin Biology https://laurabreimann.github.io/

Optics, Imaging, Microscopy, Neurotechnology Team Lead, Miller Brain Observatory @Rockefeller Carolina | Janelia | Rockefeller

Visualize, share, segment, and annotate your large 3D images online.

I'm only posting when there's no more PR to review.

Manager, Advanced Imaging Center HHMI Janelia Research Campus

Images, AI, ML, and ALife. Former: @hampshirecolg @brandeisuniversity.bsky.social @harvardmed.bsky.social @uidaho.bsky.social @hhmijanelia.bsky.social @mdc-berlin.bsky.social @ORNL. Now @biohub.org. Opinions are mine.

PI at meep-neep (MPI for neurobiology of behavior) studying worm feeding and foraging behavior. I ❤️ imaging, watching worms wiggle and Friday experiments. scholz-lab.com

She/her. I turn pictures into numbers so others can turn them into medicine. Also I yell about politics a lot. See the fantastic things my team does at https://ciminilab.github.io/WeMakeStuff . Views my own, awesome science from my amazing team.

Assistant Professor and CZI Imaging Scientist at South Dakota Mines | Nanoscience & Biomedical Engineering. Studying macrophages using pieces of sheet. Building #SnoutysaurusRex

Publishing Director at The Company of Biologists @biologists.bsky.social. Still with a big soft spot for #devbio. Opinions my own. she/her https://biologists.com

Computer scientist on a life-science mission. Working on pushing bioimage analysis, computer vision, AI/ML methods for the life sciences. Love running and pottery.

Trying to understand how behavior works by tinkering with flies, LEDs, lasers, and robots. Senior-ish group leader @ Janelia.

Group leader at @HHMIJanelia | www.voigtslab.org | @open-ephys.org

husband, father, neuroscientist, senior group leader at Janelia @hhmijanelia.bsky.social, beard enthusiast, unrepentant dilettante, he|him www.dudmanlab.org https://orcid.org/0000-0002-4436-1057

group leader @ HHMIJanelia, #neuroscience + AI 🔬 #cellpose | diversity and open-science for better science | Ⓥ | she/her | https://mouseland.github.io

Y. Eva Tan Professor in Neurotechnology, MIT. Investigator, HHMI. Leader, Synthetic Neurobiology Group, http://synthneuro.org. Scientist, inventor, entrepreneur.

Solver of GTPases molecular puzzles | Membranes | CRISPR | STED super-res |Accidental immunologist | Academic mother of 2 cheeky monkeys | Assistant prof at FU Berlin. | Head of the Nanoscale Membrane Dynamics Lab

Venture of HHMI to make pre-commercial microscopes available to a broad audience. Learn more at https://www.aicjanelia.org/

Microscopist builder

@AIOpticalBioLab.bsky.social. Group Leader #ITQB & H. Prof #UCL. #Nanoscopy & #AI for #LifeSciences. #SRRF sensei. #ERCCoG, #EMBO member. Dad. Opinions my own - henriqueslab.org -

Director, Advanced Imaging Center at HHMI Janelia Research Campus, USA. Founder, Africa Microscopy Initiative.

We invest in scientists at all career stages who make discoveries that advance human health for decades to come.

Lab head @HHMIJanelia neuroscience, deep learning, large-scale recordings #Kilosort, #Suite2p, #Cellpose, #Rastermap, #Facemap

Computer science, biology. https://www.janelia.org/people/philip-hubbard https://fediscience.org/@philiphubbard https://orcid.org/0000-0002-6746-5035

Scientist- Jack of all trades - Interest in #microscopy #immunology #devbio

NeuroCyto lab 🤹🏻 Institute of NeuroPhysiopathology at CNRS & Aix-Marseille Université 🧠 Neuronal cell biology 🦠 Super-resolution microscopy 🔬 Come for science 👨🏻‍🔬 Stay for some cooking, sneakers and bike adventures 🥘 👟🚴

VIB BioImaging Core in Leuven, microscopes, image analysis, neurons, tomography, sometimes food, weird things, life, opinions are my own

Technical Director – @gerbi-gmb.de | Standardizing open bioimaging data infrastructure TA1 lead for @nfdi4bioimage.bsky.social #OSS Maintainer for @openmicroscopy.org and @zarr.dev

BioImage Analyst at @WEHI_research. Foodie, geek, Dad. Functions on coffee and red wine. Bringer of #MicroscopistsNightmares. He/Him

Group leader @ Uni Göttingen for Computational Cell Analytics. Working on AI for biology and medicine with a focus on microscopy image analysis with deep learning. https://user.informatik.uni-goettingen.de/~pape41/

Rural neuroscientist. Connectomics. Protists. caveat emptor: https://bsky.app/profile/dddavi.bsky.social/post/3k5bnogiq5r2j

Chief Editor of Nature Biomedical Engineering. Ph.D. Previously at Nature Methods. @rita_strack on the place formerly known as twitter.

Not as bad as I feared, but not as good as I hoped.

Engaging bioimaging scientists across North America by creating an inclusive and supportive community to share, advance and succeed together. https://linktr.ee/bioimagingna 📸: Montreal Skyline at sunset - V.Orr

Assistant Professor in Bioimaging and Data Analysis and Director of the BioVisionCenter at UZH; Research Group Leader at EMBL-EBI. Loves image analysis, mountains, and birds.

Posting our lab life studying the neuronal cytoskeleton and chromatin with cool microscopes🔬Proud #GenX, #firstgen college, #intj @RITscience @stonybrooku Alum Verified: https://orcid.org/0000-0001-8481-0403

Machine Learning for Microscopy | Prof @ TU Dresden | https://scholar.google.com/citations?user=ZltxyqoAAAAJ

Open Science Software Enthusiast - Director of Scientific Computing Software at HHMI Janelia

Optical imaging, interested in STEM topics. First generation graduate from ETH Zürich Associate Professor at UT Southwestern Medical Center

Citizen science from the EM STP at the Francis Crick Institute, created with the Zooniverse and global collaborators

Neuroscientist | Navigation | Central complex bumpologist | Senior scientist at Janelia

GroupLeader@UniKonstanz, @CASCB, @MPIAnimalBehavior, Postdoc@Harvard, interested in neuroscience, neuromodulation, social modulation, insect behavior, and connectomics. #Maggotmaster #wearyourmodelorganism

Research Scientist in the Dudman lab @HHMIJanelia. PhD @Oxford, BSc @RoyalHolloway. dopamine | foraging | decision-making | hippocampus | reinforcement learning 🧠🧪👩‍🔬🐭💻 Wondering what mice are thinking about.

Ex-physicist in a biology institute, working on image analysis and building new hardware at the Francis Crick Institute ORCID: 0000-0003-0994-5652

Core dev and co-founder napari.org Core dev scikit-image.org Co-author elegant-scipy.org Research Fellow at https://www.monash.edu/researchinfrastructure/eresearch […] [bridged from https://fosstodon.org/@jni on the fediverse by https://fed.brid.gy/ ]

research scientist @ google. connectomics, machine learning, drumming, etc.

circuit motifs of action selection, execution, & refinement | functional connectomics | assoc prof | lee.hms.harvard.edu

Head of Electron microscopy facility at university of Lausanne and CEO of the Dubochet Center for Imaging Unil EPFL Unige UNIBE.. come for Electron microscopy. Stay for positive psychology and lemanic arc nature

Microscopist & Python developer at Harvard Med. Creator @fpbase.org

Epigenetic Inheritance, Neuroscience & anything biology-related https://www.odedrechavilab.com/ q.e.d: https://www.qedscience.com Organizer of “The Woodstock of Biology” TED: https://shorturl.at/myFTY Huberman Lab Podcast: https://youtu.be/CDUetQMKM6g

User of microscopes. Interested in organelles and how they move. Husband, dad, intermediate filament apologist, and postdoc in the JLS lab at HHMI Janelia Research Campus.

How do cells work together and make decisions when people have so much trouble? Group Leader @HHMIJanelia. My views are mine, not my employer’s. She/They 🏳️‍🌈

Group leader at #HHMIJanelia

Working on self organization, cilia, and IFT. Cell biologist, CLEM and cryo-EM expert at Human Technopole. Was a serious fencer in a previous life. Love pottery!!! 🏺

group leader @ HHMIJanelia, thinking about thinking, 🔬#suite2p #cellpose #facemap #rastermap | diversity and open-science for better science | Ⓥ | […] [bridged from https://neuromatch.social/@computingnature on the fediverse by https://fed.brid.gy/ ]

Artificial Intelligence For Image Data Analysis in The Life Sciences, funded by Horizon Europe, created to serve YOU!

Platform for integrating Janelia’s robust and wide-ranging efforts in developing microscopy instrumentation, probes, image analysis and visualization.

senior scientist at Janelia | single particle tracking & #microscopy 🔬 | PhD on single-molecule enzymatic dynamics | my path: 🇩🇪→🇺🇸→🇸🇪→🇺🇸 | https://scholar.google.com/citations?user=UzGfR3MAAAAJ&hl=en

Chemist at HHMI's Janelia Research Campus. Passionate about designing, building, and giving away fluorescent dyes to illuminate biological systems. Striving to be positive about all things chemistry (except ChemDraw). ORCID: 0000-0002-0789-6343

SERI-funded #ERCStG Group Leader at PSI https://structuralneurobiology.ch, CV Starr Fellow at Princeton Neuroscience Institute, founder of https://ariadne.ai

Toward Excellent, Inclusive, & Open Science Opinions are my own and do not reflect those of my employer.

Still seeking M. Ulder for joint author paper. Microscopes ✅ cats ✅ combining the two ❌ Lab --> https://www.kcl.ac.uk/research/culley-group

connectomics @ Google Research

Bioimage analysis and computer vision enthusiast. Whenever I can, I do software too. Ikerbasque | University of the Basque Country (UPV/EHU) | DIPC | Biofisika Institute ORCID: 0000-0003-0229-5722

Neuroscientist @Janelia, HHMI www.ahrenslab.org

Neuroscientist and cell biologist dedicated to unraveling how organelles adapt their structure and function to sustain neuronal signaling and metabolism. Postdoc in the JLS lab @ HHMI Janelia

Professor of physics and bioengineering @EPFL. Microscopy and mitochondria devotee. This view is all mine.

HHMI’s Janelia Research Campus in Ashburn, Virginia, is innovating research practices and technologies to solve biology’s deepest mysteries. https://www.janelia.org/

OME is a consortium of universities, research labs, industry and developers producing open-source software and format standards for microscopy data. https://www.openmicroscopy.org/

R&D Scientist at ZEISS Group | PhD in Physics | Spearheading Development of Innovative Optics & Photonics Solutions Website: http://ulrikeboehm.org

Imaging scientist, light-sheet aficionado, #mesoSPIM developer, open source contributor. Building cool microscopes for cool people. www.mesospim.org www.github.com/nvladimus

Interested in mechanistic models of animal intelligence. Group Leader at HHMI Janelia Research Campus.

Director, Open Science Strategy @ HHMI

Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL

Science, somewhere down in Texas. https://www.dean-lab.org https://thedeanlab.github.io

scalable data analysis, modeling, AI, software design at HHMI Janelia https://mastodon.social/@herrsaalfeld

scientific illustrator - https://somedonkey.work (& unscientific artist - https://juliakuhl.myportfolio.com)

Understanding life. Advancing health.

Cognitive Science PhD student, Johns Hopkins 🧠 Previously: HHMI Janelia 🇺🇸, AutoML Lab 🇩🇪, Gatsby Unit UCL 🇬🇧 www.yashsmehta.com 🇮🇳

Trains, planes & bicycles. Vegetarian food. Portland, OR based after two decades in Baltimore. Find me on Mastodon: @perlman@urbanists.social

Dedicated to drug discovery, enthralled by science. 5 kids. She. SAB Recursion. Founder SyzOnc. Lab at Broad Institute. Opinions my own.

Ass. Prof & Director Goeddel Family Technology Sandbox; CZI Imaging Scientist; Hard-of-hearing; Follows≠endorse; ❤️ organelles/deep-learning/cochlea/neurons

Biomedical Computer Vision & Language Models, scads.ai / Leipzig University, also NFDI4BIOIMAGE, NEUBIAS/GloBIAS, GPUs, AI, ML 🔬🖥️🚀 views:mine

Postdoc in the Rubin lab at Janelia | Neuronal circuitry underlying social behavior | Host-microbe interactions | Ph.D. Caltech | she/her | https://www.janelia.org/people/katie-schretter

Programmer/scientist at HHMI Janelia Research Campus. Research interests include AI/ML, datastores, viz for imaging and sparse volumes. Consumer and very infrequent producer of fiction.

Computer scientist. Scientific computing, image analysis, and artificial life. Views are my own and do not reflect my employers. Web: https://kyleharrington.com 🌉 bridged from ⁂ https://mastodon.social/@kisharrington, follow @ap.brid.gy to interact

Scientist at Paul Langerhans Institute Dresden. Interested in the structural features of pancreatic beta cell function and signaling. 🔬

UCSD, HHMI Neuroscience, protein design, climate change

PhD Student working on bioimaging inverse problems with @florianjug.bsky.social at @humantechnopole.bsky.social + @tudresden.bsky.social | Prev: computer vision Hitachi R&D, Tokyo. 🔗: https://rayanirban.github.io/ Likes 🏸🏋️🏔️🏓 and ✈️

Group Leader @ Janelia Research Campus, protein engineer, 🏳️‍🌈 she/they

BioImage Analysis Lead at AIC Janelia

Project Scientist - CellMap Project Team - HHMI Janelia Campus.