Sergey Ovchinnikov

the Open Molecular Software Foundation is dedicated to the creation and implementation of the latest and greatest open comp.chem software.

We are a global community of computational protein engineers and modelers from both academia and industry. An @omsf.io project organized by @cdbahl.com, @sokrypton.org, and @nickpolizzi.bsky.social https://bpdmc.org

Aging scientist. Worm expert. Community-engaged teacher. Lab at Northeastern University. I watch worms die to learn how to live. Lab: apfeldlab.mystrikingly.com ORCID: orcid.org/0000-0001-9897-5671

CS PhD Student @ Cornell University, Prev. Software Engineer in the Marks Lab @ Harvard Med

Postdoc @andolab.bsky.social at Cornell, PhD at Yaghi Lab at UC Berkeley

Postdoctoral fellow at Academia Sinica, studying rice root plasticity.

Protein jockey at University of Cambridge, CSO at Qkine, Professor Visitante at USP. Cyclist. https://hyvonen.bioc.cam.ac.uk

Study genetic conflicts professionally. Try to avoid conflicts in personal life (with mixed results). Fred Hutch Basic Sciences, UW Genome Sciences, HHMI. Posting in a personal capacity. My posts don’t reflect my employers’ opinions.

Postdoc, Manning Group, Syracuse University

Associate Professor UC Berkeley, puzzle-solver interested in comparative immunology 🌱🍄‍🟫🧬 and computational biology 💻

a sort of scientist. viruses and antibodies. structure and biophysics. mass spec and cryoEM | Voorzitter SP Culemborg

Ph.D (dr ès sc.) in Biochemistry. Scientist in the LBS at EPFL. Chaperonologist. Punk. Love cats. Aka W.Oodendijk. Vegan. Metalhead. Socialist. Born at 345ppm. Try to fight scientific misinfo. English and Swiss-French. Web: http://chercheurjuteux.com

HPC and computational biology. Somewhere in 🇦🇺.

Assistant professor @Dalhousie University in Canada. We study # muscle function in #Drosophila. I bike to work. https://flymuscles.wixsite.com/flymuscles

My alphabet soup only contains A's, C's, T's and G's. Computatinal biologist with extensive experience in the microbiome/virome and anelloviruses.

Synthetic biologist and protein engineer.

Postdoc @ UC Berkeley

Systems Bio, comparing things to each other, protein language models, plants, Asst prof UArizona MCB

Scientist + Teacher UvA/Amsterdam | Cells | Molecules | Microscopy | Fluorescent Proteins | Biosensors | Lifetime imaging | Open Science | dataViz | R | web apps Homepage: https://joachimgoedhart.github.io/ DataViz Apps: https://huygens.science.uva.nl

Molecular simulations and AI for proteins! PhD student @ MIT website: http://sites.google.com/view/soojungy/

CSO @ Resonate Bio | Vienna - Austria 🧲 NMR Spectroscopy in Drug Discovery and Design | Structural Chemistry | Molecular Recognition

Science. Humanity. IMDEA Nanoscience, Madrid

Computational chemist/structural bioinformatician working on improving molecular simulation at MRC Laboratory of Molecular Biology. jgreener64.github.io

Principal Bionformatician @nanopore. Ex: Postdoctoral fellow @ NIH; Researcher @ CAB. Views are my own; #StandWithUkraine Support Ukraine!

Our team studies #Rloop & #RNA 🧬 with #biochemistry #cryoEM 🔬❄️ #crystallography💎 to understand how they control life! Views from Charles https://biochem.emory.edu/bou-nader-lab/

Protein ML. Synbio. Enzyme discovery and engineering. Glandular trichomes. Proud Washington State alum.

Predoctoral Research Assistant at the Llorca lab @cniostopcancer.bsky.social working on mTORC1 signaling and cryo-EM ❄️🔬. Intrigued by the structural mechanisms of protein assemblies involved in endomembrane signaling and trafficking 🧪.

curious about all things bio & solving tricky structural puzzles / mlbio for protein design, engineering & drug disco / cytokine immunologist / stanfordberkelyucsf & dnaxgenentech / recovering twit

💼 Junior Group Leader at CNIO @cniostopcancer.bsky.social 🔬Designing proteins and studying their structure #cryoEM #proteindesign #ai #ml 🎓 Alumni @ UCLA, John Innes Centre, UAB 🌍 Lab website: https://www.rcglab.com

Assistant Professor at University of Texas at San Antonio. Study evolution/regulation of selfish genes. Manage two labs. Research lab🔬🧪🧬🖥️ with some ease but the other lab 🐶🐾 is un-manageable! https://www.anti-sense.org/

Associate Professor @upcite.bsky.social. Molecular Modeller of Peptide & Membrane Proteins.

PhD student (MRC-UofG CVR) 🏰 antiviral defence | 🧬 evolution | 🔮 protein structure prediction

Microbial ecology & evolution 🦠👩🏻‍🔬 interested in genomic, metabolic, and physiological diversity and their impacts on aquatic systems 🌊🏝️🐠 Keen on oligotrophs 💫 Post-doc @ MBL 🦀 Previous NOAA Knauss Fellow in Ocean Observing 🌎 https://sarahjtucker.com/

BME & CS @Columbia | AI x Bio Researcher @ColumbiaMed | Kaggle Competitions Master https://stevenyuyy.us

PhD student @ Computational Systems Biology & Lab of Gene Technology. Investigating PTMs in viruses and bacteria with bioinformatics 💻🦠

postdoc @mpi-cbg.de computational biology | disease genetics

PhD student at @HebrewU, working on SLIMs of the ubiqutin system. Member of @UbiMotif network, @RosettaCommons and @FurmanLab

Structural Biologist at the University of St Andrews. Host:pathogen interactions. Gram-positive bacteria (mainly Streptococcus pyogenes) and Rift Valley fever phlebovirus. cryoEM (novice), NMR (veteran), XRC.

💻 Computational chemist who loves to understand how biomolecules interact at the molecular level 📍 Molecular Modeling Group at the Leibniz Institute at the Technical University of Munich (DE)

Staff scientist @biozentrum.unibas.ch using algorithms to look at tiny stuff inside cells, or #cryoET if you prefer. Here I talk mostly about my research. Views my own. 🇧🇷 in 🇨🇭

Professor of Chemistry@Universidade de Coimbra. Chemistry, cooking, clarinets, symmetry, music, art, computers and programming all make me tick! https://orcid.org/0000-0003-2393-0203

RNA & Metabolism. Ancient companions for Life. RNA as spatial organizer of the Cell. IDPs, biomolecular condensates and RNA fun @HymanLab. MBL Physiology '25. And birds. ebird.org/profile/MjcyMDU0Nw inaturalist.org/people/9261834

Removing barriers to computational drug discovery one bit at a time. Associate Professor in Computational and Systems Biology at the University of Pittsburgh. https://bits.csb.pitt.edu/

Asst. Professor of Chemistry at Cornell University. Interests: Bio, Chem, ML, Statistical Estimation, Electron Microscopy, Good code.

Comp chem Ph.D @ Zhang lab NYU ai/ml molecules and proteins | allostery | stem outreach | knicks and brooklyn

ML + Bio (prev CV) http://jozhang97.github.io

Ph.D. / Protein Science / Apptainer (Singularity) おじさん / フォローはお気軽に🥳 / My posts and opinions are my own🙃

Senior reporter at Nature, views my own. Journalist covering physics, AI, policy. Attempting to stop lurking and start posting. See my stories at nature.com/news

Peering at life's blueprints! We use X-ray crystallography & cryo-EM to reveal 3D structures of proteins & other big molecules, understanding how they work. #StructuralBiology #Proteins #CryoEM #XrayCrystallography

Images, AI, ML, and ALife. Former: @hampshirecolg @brandeisuniversity.bsky.social @harvardmed.bsky.social @uidaho.bsky.social @hhmijanelia.bsky.social @mdc-berlin.bsky.social @ORNL. Now @biohub.org. Opinions are mine.

PhD researcher @ University of Copenhagen & Gubra Machine Learning for design and optimization of peptide therapeutics

Bioinformatics, protein modeling, cryoEM, drug screening, function prediction. Daisuke Kihara, professor of Biol/CS, Purdue U. https://kiharalab.org/ YouTube: http://alturl.com/gxvah

🎓 ECE @Seoul National University 🇰🇷 Grad student @SteineggerLab

Computational physical chemist. Currently Postdoc@BAM (Bundesanstalt für Materialforschung-und prüfung). Real Football and American Football Enthusiast

PhD | He/Him - Focussed and following on Microbial | Fungal | Plant | Ocean - Computational Research - DL on BioSeq | Proteomics | Chemical - 🦀 Rust FullStack | PyTorch DL - Github:https://github.com/sablokrep - Crates:https://crates.io/users/sablokrep

Structural basis of peptide-mediated protein communication and function @hebrewuniversity.bsky.social Member of @rosettacommons.bsky.social Posts by lab members.

Postdoc at MIT CSAIL and Harvard Medical School. Working on geometry processing for healthcare and biology https://people.csail.mit.edu/abulnaga/

From Boston, MA. I'm @pearlf on the other blue-colored place. Founder of Cambridge BioPartners, Inc. I post mostly healthcare-related and biotech-related news items.

Ribosomes and RNA language models. Professor at UC Berkeley. https://sites.google.com/berkeley.edu/cate-lab/home

UCB ChemBio PhD candidate in Schepartz Lab | Northwestern Alum | peptides, RNA, and the like (and growing to be phage-curious…) | 🇵🇷🇭🇰

All posting done on personal time, using personal device, and only reflect my personal opinions.

Wayne ~~ ~Jupyter Distinguished Contributor ~ ~ ~ http://fomightez.github.io ~ ~ ~ ~ ~ ~ I run Proteopedia's social media too ~~ ~ He/His

PhD student @mit studying anti-phage defense systems using machine learning

F_vaggi on Twitter. Senior staff scientist at Google X, previously Amazon.

Epigenetic Inheritance, Neuroscience & anything biology-related https://www.odedrechavilab.com/ q.e.d: https://www.qedscience.com Organizer of “The Woodstock of Biology” TED: https://shorturl.at/myFTY Huberman Lab Podcast: https://youtu.be/CDUetQMKM6g

Data Scientist Generative AI @BayerCropScience. ML for Plant Biology. PhD @IowaStateUniversity https://www.linkedin.com/in/koushik-nagasubramanian/

Ciudad Univ. ARG. Vía lâctea.

‪MSCA fellow at @crg.eu‬ w/M. Dias and @jonnyfrazer.bsky.social > Biological Physics | Proteins | Comp Bio | ML https://scholar.google.com/citations?user=n55NtEsAAAAJ&hl=en

Asst. Prof. Uni Groningen 🇳🇱 Comp & Exp Biochemist, Protein Engineer, 'Would-be designer' (F. Arnold) | SynBio | HT Screens & Selections | Nucleic Acid Enzymes | Biocatalysis | Rstats & Datavis https://www.fuerstlab.com https://orcid.org/0000-0001-7720-9

scientist at UC Berkeley inventing advanced genomic technologies lover of molecules, user of computers https://scholar.google.com/citations?user=63ZRebIAAAAJ&hl=en

Associate Teaching Professor of Computer Science at UC San Diego, consulting for PlayStation and Blizzard, Bioinformatician by training, SD-raised. https://niema.net

Interested in microbial ecology & evolution. Views are only my own. (he/him) 🎓: https://scholar.google.com/citations?hl=en&user=OBPpZq4AAAAJ&view_op=list_works&sortby=pubdate 👨‍💻: https://github.com/raufs

PhD student at Trevor Lithgow's group Monash BDI. Facultative bioinformatician who in love with phages and their dark matters.

Computational Structural Biology, The Hebrew University of Jerusalem

Assistant Professor at UW Genome Sciences developing/applying proteomic technologies | he/him/his | Views are my own.

Associate professor at ETH Zurich, studying the cellular consequences of genetic variation. Affiliated with the Swiss Institute of Bioinformatics and a part of the LOOP Zurich.

#compchem assistant professor at #UF chemistry. We work on protein-peptide and protein- nucleic acid structure predictions with integrative biology tools.

Computational Biology-Chemistry-Medicine Postdoc at University of Zurich, she/they

Ph.D. in Human Genetics at Vanderbilt University. Interested in population genetics, functional genomics, cancer, and deep learning. https://github.com/mjbetti

Trailrunner, Bioinfo Researcher at HKU D24H linktr.ee/carloshk

Computational Biochemist @uspoficial.bsky.social - Molecular simulations | Drude Polarizable FF | Enzyme engineering | Sustainability ♻️. Trying to grow my own agroforestry system 🌳🫒. he/him 🇧🇷 https://mdpoleto.github.io/

PhD student studying TRP channels by cryo-EM at Sobolevsky lab @sobolevsky.bsky.social

Director | Protein Structure, Analysis, & Design Core Adj Assistant Professor | Molecular Physiology & Biophysics University of Iowa Structural Biology | Biophysical Characterization | Protein Design Views are my own.

Postdoc at @mpimicrobiomarburg.bsky.social in Marburg. Studying how #methanogens produce #methane. Alumnus @unimarburg.bsky.social, @daadworldwide.bsky.social, and #Fulbright. He/him 🏳️‍🌈 #firstgen 🦠🧬🤓🐈‍⬛🎤

Author State of Science, Illuminating Disease, Bioluminescence, Cleaner Greener Planet and Glowing Genes. Life is fun when GFP glows. Chemistry professor, teaching with AI, @conncoll 🇿🇦 🇺🇸🇩🇪

Group Leader at @pasteur.fr‬ in Paris | Member of the @virusfusion007 Unit | Biochemist PhD, Structural biologist | #herpes #ERVs #retroviruses

Research Fellow in Bioinformatics (Proteins + ML + Function) @ CATH University College London | Mountains, Proteins, Food in that order | MSCA Alumn | Replies to emails!

Como todos los hombres de Babilonia, he sido procónsul; como todos, esclavo; también he conocido la omnipotencia, el oprobio, las cárceles. very sane ai newsletter: verysane.ai random bloggy bits: segyges.leaflet.pub

Plants, specialized metabolism, synthetic biology, protein evolution, and everything in between. Postdoc at Sattley & Fordyce Labs, Stanford Previously SynBio @ Voigt & Laub Labs, MIT

Head of Sci/cofounder at futurehouse.org. Prof of chem eng at UofR (on sabbatical). Automating science with AI and robots in biology. Corvid enthusiast

Cycling, walking, science, reason, cats, dogs, ramen. Mostly vegan, sometimes vegetarian, periodically pescatarian. 🏳️‍🌈 🇨🇦 #accessibility #A11y #yyj

ml research scientist at Ferruz Lab @noeliaferruz.bsky.social‬ @crg.eu | protein design | prev @bsc-cns.bsky.social‬ @novartis.bsky.social‬

phd student at MDC Berlin @mdc-berlin.bsky.social @mishakudryashev.bsky.social‬ lab cryo-em/teamtomo

Master's student in Medicinal Chemistry, UniPG. My thesis project focuses on Computational Chemistry and Biophysics.